Gene PP_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0081 
Symbol 
ID1043562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp91077 
End bp91448 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content61% 
IMG OID637143453 
Producthypothetical protein 
Protein accessionNP_742251 
Protein GI26986826 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3805] Aromatic ring-cleaving dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.341198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000339661 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCAGGTGG TGATGGTTGG ACCGCAATCA GGAGTTATCG TGCAGAGGAT CAAGGGTTAC 
CACGCCCACG TTTATTACGA CGCAGCCACC ATGGAGCAGG CCCGCGAACT GTGCGAGGAG
GCGGCGCGGC TGTTCCCCGT GACCATGGGG CGCATGCACC AGAAACCGGT TGGGCCGCAT
CCAGACTGGA GTTGCCAGCT GGCGTTCGGG CCGGAAGTGG TGGGGGTGGT TTTGCCTTGG
TTGGCGCTGT ACCGCAAGGG CCTGGTGGTA TTCATGCATC CGGAAACCGG GGATGAACTG
GCGGATCACC GGGATCATGC GATCTGGATG GGGGCCGTGC GGCCATTGAA TCTATCGGTT
TTTGGGGGCT AG
 
Protein sequence
MQVVMVGPQS GVIVQRIKGY HAHVYYDAAT MEQARELCEE AARLFPVTMG RMHQKPVGPH 
PDWSCQLAFG PEVVGVVLPW LALYRKGLVV FMHPETGDEL ADHRDHAIWM GAVRPLNLSV
FGG