| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0079 |
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| Symbol | |
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| ID | 1043560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 89425 |
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| End bp | 90324 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637143451 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_742249 |
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| Protein GI | 26986824 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03418] putative choline sulfate-utilization transcription factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000353876 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTGAGC ACCTTGCCGG GTTGTCGCTG GATACCTTGC GCGTATTCGA GGCTGCTGCG
CGCCTGCGTG GCTTTACCGC TGCGGCGCTG GAGTTGGGTA CCACGCAGCC GGCAGTGAGC
CAGCAGGTGA AGCGCCTGGA GGCACAGTTG GGCACGCGCC TGTTTGACCG CATTTACCGG
GGCATCGAGC TGACCGAGGC TGGCCAGTTG CTGTTCGAAC AGGTGCATCA GGGGCTGCAG
TCCATGGATG ACGGTATTGC CCAGGCCGGC GGGCGCGGCC AGCGCGAAGT GCTGCAGGTC
GCCACCGACT TTGCCTTTGC GGCGTTCTGG CTGATGCCAA GGCTGCAGCG CTTTCATGAG
GCTTATCCAC AGGTGGATGT GAGCCTGGTG ACGGGTGAGC GCAGCCAGGG CATGTTGCGC
CCGGACATTG ATGTGGCGGT GCTGTTTGGC GATGGACGCT TTCACCAAGG AGAAAGCCGC
TGGCTATTCG ATGAGGAAGT GTTCCCGGTG TGCAGCCCCC ATCTGATTCA TGGCAAAGCC
TTGTCAGCTG TGGCTTTGCA ACGATTGCCG CTGCTGCATT TGAAGGGCGA GCAGGCCAGC
CGCTGGTTTG ACTGGGCGGG GGTATTTCGT GGGTTTGGTG TGGAAAGCTC ACCGCCGGCG
GGGCAGCTGC GGTTTGATAA CTATACCTTG CTGATTCAGG CAGCGATTGC CGGGCAAGGG
GTGGCGATTG GCTGGGCGCA CCTGGTGGAC GGGTTGGTGG AGCAAGGGTT GCTGTGCCGG
CCGCTGGAGG GGAGTTTGCG CTCGGAACGC GGCTATTACG TAGTCTTACC GCCGCGCAAG
CGGCGTGGGG CGTTGATCGA GCGGTTTGTG GATTGGTTGG AGCAGGAGCG CAGCCTTTGA
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| Protein sequence | MFEHLAGLSL DTLRVFEAAA RLRGFTAAAL ELGTTQPAVS QQVKRLEAQL GTRLFDRIYR
GIELTEAGQL LFEQVHQGLQ SMDDGIAQAG GRGQREVLQV ATDFAFAAFW LMPRLQRFHE
AYPQVDVSLV TGERSQGMLR PDIDVAVLFG DGRFHQGESR WLFDEEVFPV CSPHLIHGKA
LSAVALQRLP LLHLKGEQAS RWFDWAGVFR GFGVESSPPA GQLRFDNYTL LIQAAIAGQG
VAIGWAHLVD GLVEQGLLCR PLEGSLRSER GYYVVLPPRK RRGALIERFV DWLEQERSL
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