Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0073 |
Symbol | hemF |
ID | 1043554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 83261 |
End bp | 84172 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143445 |
Product | coproporphyrinogen III oxidase |
Protein accession | NP_742243 |
Protein GI | 26986818 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0408] Coproporphyrinogen III oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.188544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000371882 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTAGCC GCACCGAGGC CGTGAAAGCC TACCTGCTCG ACCTGCAAGA CCGCATCTGC TCTGCCCTCG AAACAGAAGA CGGCGGTGCC CGCTTCGTCG AGGACGCCTG GGTGCGCGAA GCCGGTGGCG GGGGCCGCAC GCGGGTTATC GGTGAGGGCA ACGTGATCGA AAAAGGCGGG GTCAACTTCT CCCATGTGTT TGGTAGCGGC CTGCCGCCGT CGGCCAGTGC CCACCGTCCC GAACTGGCAG GCCGTGGCTT CGAAGCCTTG GGTGTGTCGC TGGTGATACA CCCGCACAAC CCGCATGTGC CCACTTCCCA CGCCAACGTT CGCTTCTTCA TCGCCGAAAA GGAAGGTGAA GAGGCCGTAT GGTGGTTTGG CGGCGGCTTT GACCTGACGC CATACTATGG CAACGAAGAA GACTGCATTC ACTGGCACCG AGTGGCCGAG CAGGCTTGCG CGCCGTTTGG CGCCGACGTG TACCCGCGCT ACAAAGCCTG GTGCGATCGC TACTTCCACC TCAAGCACCG TGGCGAGCCA CGCGGTATCG GCGGCTTGTT CTTCGATGAC CTGAACGAGT GGGACTTCGA CACTTGCTTC GCCTTCATCC GCGCCATTGG CGATGCCTTC GTCGACGCCT ACCTGCCAAT CGTCCAGCGC CGCAAGAACA CGCCCTACAC CCCGCAGCAG CGCGAGTTCC AGGAATACCG CCGTGGCCGG TACGTGGAGT TCAACCTGGT CTATGACCGC GGCACCCTGT TCGGTCTGCA GTCCGGTGGC CGCACCGAAT CCATCCTCAT GTCGCTGCCA CCGCAGGTGC GTTGGGGTTA TGACTGGAAG GCCGCGCCCG GCAGTGAAGA AGCGCGCCTG ACAGAGTACT TCCTGCAAGA CCGCGACTGG CTCGGCCAGT AA
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Protein sequence | MTSRTEAVKA YLLDLQDRIC SALETEDGGA RFVEDAWVRE AGGGGRTRVI GEGNVIEKGG VNFSHVFGSG LPPSASAHRP ELAGRGFEAL GVSLVIHPHN PHVPTSHANV RFFIAEKEGE EAVWWFGGGF DLTPYYGNEE DCIHWHRVAE QACAPFGADV YPRYKAWCDR YFHLKHRGEP RGIGGLFFDD LNEWDFDTCF AFIRAIGDAF VDAYLPIVQR RKNTPYTPQQ REFQEYRRGR YVEFNLVYDR GTLFGLQSGG RTESILMSLP PQVRWGYDWK AAPGSEEARL TEYFLQDRDW LGQ
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