Gene PP_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0073 
SymbolhemF 
ID1043554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp83261 
End bp84172 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content63% 
IMG OID637143445 
Productcoproporphyrinogen III oxidase 
Protein accessionNP_742243 
Protein GI26986818 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0408] Coproporphyrinogen III oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.188544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000371882 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTAGCC GCACCGAGGC CGTGAAAGCC TACCTGCTCG ACCTGCAAGA CCGCATCTGC 
TCTGCCCTCG AAACAGAAGA CGGCGGTGCC CGCTTCGTCG AGGACGCCTG GGTGCGCGAA
GCCGGTGGCG GGGGCCGCAC GCGGGTTATC GGTGAGGGCA ACGTGATCGA AAAAGGCGGG
GTCAACTTCT CCCATGTGTT TGGTAGCGGC CTGCCGCCGT CGGCCAGTGC CCACCGTCCC
GAACTGGCAG GCCGTGGCTT CGAAGCCTTG GGTGTGTCGC TGGTGATACA CCCGCACAAC
CCGCATGTGC CCACTTCCCA CGCCAACGTT CGCTTCTTCA TCGCCGAAAA GGAAGGTGAA
GAGGCCGTAT GGTGGTTTGG CGGCGGCTTT GACCTGACGC CATACTATGG CAACGAAGAA
GACTGCATTC ACTGGCACCG AGTGGCCGAG CAGGCTTGCG CGCCGTTTGG CGCCGACGTG
TACCCGCGCT ACAAAGCCTG GTGCGATCGC TACTTCCACC TCAAGCACCG TGGCGAGCCA
CGCGGTATCG GCGGCTTGTT CTTCGATGAC CTGAACGAGT GGGACTTCGA CACTTGCTTC
GCCTTCATCC GCGCCATTGG CGATGCCTTC GTCGACGCCT ACCTGCCAAT CGTCCAGCGC
CGCAAGAACA CGCCCTACAC CCCGCAGCAG CGCGAGTTCC AGGAATACCG CCGTGGCCGG
TACGTGGAGT TCAACCTGGT CTATGACCGC GGCACCCTGT TCGGTCTGCA GTCCGGTGGC
CGCACCGAAT CCATCCTCAT GTCGCTGCCA CCGCAGGTGC GTTGGGGTTA TGACTGGAAG
GCCGCGCCCG GCAGTGAAGA AGCGCGCCTG ACAGAGTACT TCCTGCAAGA CCGCGACTGG
CTCGGCCAGT AA
 
Protein sequence
MTSRTEAVKA YLLDLQDRIC SALETEDGGA RFVEDAWVRE AGGGGRTRVI GEGNVIEKGG 
VNFSHVFGSG LPPSASAHRP ELAGRGFEAL GVSLVIHPHN PHVPTSHANV RFFIAEKEGE
EAVWWFGGGF DLTPYYGNEE DCIHWHRVAE QACAPFGADV YPRYKAWCDR YFHLKHRGEP
RGIGGLFFDD LNEWDFDTCF AFIRAIGDAF VDAYLPIVQR RKNTPYTPQQ REFQEYRRGR
YVEFNLVYDR GTLFGLQSGG RTESILMSLP PQVRWGYDWK AAPGSEEARL TEYFLQDRDW
LGQ