Gene PP_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0066 
Symbolsun 
ID1043547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp76233 
End bp77543 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content68% 
IMG OID637143438 
Productsun protein 
Protein accessionNP_742236 
Protein GI26986811 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000506957 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAACCCAC GCCTCGCCGC CGCCCGTGCG CTGGCCGCTG TGCTCAGCGG CAAGGCTTCG 
CTGAACAGCT CGCTGCCGGC GCAACTGGAC AAGGTAGATG AACGCGACCG CGGCCTGACC
CAGGACCTGG CGTTCGGTAC CGCACGCTGG CAGCCACGCC TCGACCTGCT GGCCGCACAG
CTGCTGCAAA AGCCCTTCAA GGCAGCCGAT GCCGATGTTC AGGCGCTGCT GCTGGTCGGC
CTGTACCAGC TGTTCTACAC GCGCATTCCG GCCCATGCCG CCATCGGCGA GACCGTGGGC
TGTGCCGACA AACTGAAGAA GCCGTGGGCC AAGGGCCTGC TCAATGCCGT GCTGCGCCGT
GCCCAGCGCG AAGGCGAGGA GCTGCTCGCC GGCATGGAGC GCGACCCGGT GGTGCGTACC
GCGCACCCGC GCTGGCTGCA GAAGGCGCTG AAAGCCTTCT GGCCAGAGCA GTGGGAGGCC
ATCTGCGCCG CCAACAATGC CCACCCTCCG ATGATTCTGC GGGTCAACCG CCGTCACCAT
AGCCGCGATG CCTACCTGGC ACTGCTGGCC GAAGCCGGCA TCGGCGCCAG CGCATGCCAG
TACAGCCGGG ATGGCATCGT GCTGGCCGAA GCCTGCGACG TGCGCGGCCT GCCAGGCTTC
GCCGAAGGCT GGGTGAGCGT GCAGGACGAA GCTGCGCAGC TATCTGCCGA CCTGCTGGAA
CTGGCCCCCG GCCAACGCGT GCTCGATGCT TGCTGCGCAC CGGGCGGCAA GACCTGCCAC
CTGCTGGAGG CCGAGGCTGG CCTGGCGAAC ATGGTGGCCA TCGACCTCGA AGCCAAGCGC
CTGACCCGCG TGCGAGAAAA CCTCGACCGC CTGCAACTGG ACGCCGAGCT GATCGCCTGC
GATGCCCGCG ACACTGCCAG CTGGTGGGAC GGCAAGCCAT TCCAGCGCAT TCTGCTCGAC
GCGCCGTGCT CGGCCACCGG CGTGATTCGC CGCCACCCGG ACATCAAGAT GACCCGCCAA
GCCGACGACA TCCCGGCTTT GGCCACGCTG CAAGGCGAGC TGCTCGATGC CCTGTGGCCG
ACCCTGGAAG TGGGCGGCAT GCTGCTATAC GCCACCTGCT CCACATTGCC GACCGAGAAC
ACTGAAGTGA TCAAAGCCTT CCTCGCGCGC ACCCCGGGCG CTCGTGAGCT GGACCTGGCG
ACCGAAGCCG GCCTGCGCCA GCCCCACGGC CGTCAGTTGC TGGCCCAGGA AGGCGGCCAC
GACGGTTTCT ACTATGCCAA GCTGATCAAG ATCGCCGCCT CGCGCGGATA A
 
Protein sequence
MNPRLAAARA LAAVLSGKAS LNSSLPAQLD KVDERDRGLT QDLAFGTARW QPRLDLLAAQ 
LLQKPFKAAD ADVQALLLVG LYQLFYTRIP AHAAIGETVG CADKLKKPWA KGLLNAVLRR
AQREGEELLA GMERDPVVRT AHPRWLQKAL KAFWPEQWEA ICAANNAHPP MILRVNRRHH
SRDAYLALLA EAGIGASACQ YSRDGIVLAE ACDVRGLPGF AEGWVSVQDE AAQLSADLLE
LAPGQRVLDA CCAPGGKTCH LLEAEAGLAN MVAIDLEAKR LTRVRENLDR LQLDAELIAC
DARDTASWWD GKPFQRILLD APCSATGVIR RHPDIKMTRQ ADDIPALATL QGELLDALWP
TLEVGGMLLY ATCSTLPTEN TEVIKAFLAR TPGARELDLA TEAGLRQPHG RQLLAQEGGH
DGFYYAKLIK IAASRG