Gene PP_0064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0064 
Symbol 
ID1043545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp74510 
End bp74824 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content60% 
IMG OID637143436 
ProductTPR domain-containing protein 
Protein accessionNP_742234 
Protein GI26986809 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000302311 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCGCGAAT CGCTGGAGAA GATGCTGGCC AAAGGTGTGG ATAACCCGCT GCTGAGGTTT 
GGCCTGGGCA AGGCCTGGCT GGATGAAGGC AACGGCGCTG AAGCAGCGGT GCACCTGGCA
CGCTGTGTAG AGCAGGATCC GAAATACTCG GCAGCATGGA AGCTGCTGGG TAAGGCCTAT
CAGCTGCAGG GCGAGCTGGC GGCGGCGCGC AAAGCGTGGG AAGACGGGAT CGTGGCGGCG
CAGGCCCATG GTGACAAGCA GGCCGAAAAA GAAATGACCG TTTTTCTCAA GAAGCTGAAC
AAGACATCGG CTTGA
 
Protein sequence
MRESLEKMLA KGVDNPLLRF GLGKAWLDEG NGAEAAVHLA RCVEQDPKYS AAWKLLGKAY 
QLQGELAAAR KAWEDGIVAA QAHGDKQAEK EMTVFLKKLN KTSA