| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0055 |
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| Symbol | |
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| ID | 1043536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 63828 |
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| End bp | 64715 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637143427 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_742225 |
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| Protein GI | 26986800 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000554839 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCGACT GGAATGATCT GCGGTTTTTC CTCGAGTTGC AGCGCAGCGG CCGCTTGCTG
ACCGCCGCCA AGCGCCTGAA CACTACCCAC AGCACCGTGG CCCGGCATAT CGAGAGCATC
GAGCAGAGCC TGGGGACCGC GCTGTTCGTG CAACATGCCC AGGGGTACGA GCTGACCCCC
TCGGGTCAAG CCCTGCTCAA GCATGCCGAA GCCATGGAGA ACGTCGCCCT GCTGGCACAG
GAGGAAATCA CCCAGGCCAT CACCCCGCTG GGCAAGATTC GCCTGGGGGT AACCGAAGGC
ATCGGCATCA TGTTCTTCAC CCCACGCATG AACGCGTTGT TCGAGCGCTA CCCCGGCCTG
GAGGTGGAAT TGGTAGCGGT GCCGCGCTTC GTCAGCATCC TCAACCGCGA GGCAGAAATC
AGCATCCATC TGGAGCGGCC CAACGCCGAT CTGCTGATCA CCCGCAAACT CACCGACTAC
CGCCTGGCGC TATACGCCAG CCAGGCCTAC CTGGACCGCG CGCCGCCACT GCGCCACCGC
GAAGACCTGG CCCGGCACAG CTGGATCGGC TACGTTGACG ATTTGCTGTT CAGCCAGGAA
CTGCTGTTTC TCAACAGTTT CTGCCGAGTA CCCAACGTGG TGTTTCGAAG CACCAGCGTG
ATCGCCCAGC AAGCCGCCGC CCGCGCCGGG CTGGGCATCG CCGTGCTGCC CAACTACATG
GCCCGCCACG ACCCGACACT GGTGCGCGTG CTGCCGGGAG AAACCATCCA GCGCAGCTAC
TGGATCTGCA CCCGCCGCGA GCTGCACAAG TCTGTGCGCC TGCGGGTGGT GTGGGACTAC
CTGCTGGCGT TGTGCGCGGC CGAACAAAGC GAGTTGCTAG CCGAGTAG
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| Protein sequence | MFDWNDLRFF LELQRSGRLL TAAKRLNTTH STVARHIESI EQSLGTALFV QHAQGYELTP
SGQALLKHAE AMENVALLAQ EEITQAITPL GKIRLGVTEG IGIMFFTPRM NALFERYPGL
EVELVAVPRF VSILNREAEI SIHLERPNAD LLITRKLTDY RLALYASQAY LDRAPPLRHR
EDLARHSWIG YVDDLLFSQE LLFLNSFCRV PNVVFRSTSV IAQQAAARAG LGIAVLPNYM
ARHDPTLVRV LPGETIQRSY WICTRRELHK SVRLRVVWDY LLALCAAEQS ELLAE
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