| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0043 |
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| Symbol | |
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| ID | 1043524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 46213 |
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| End bp | 49374 |
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| Gene Length | 3162 bp |
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| Protein Length | 1053 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637143415 |
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| Product | CzcA family cobalt/zinc/cadmium efflux transporter permease |
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| Protein accession | NP_742213 |
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| Protein GI | 26986788 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.815586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000942954 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTGAAC GTATCATCAG ATTCGCCATC GAGCAGCGCA TCGTAGTAAT GATCGCCGTT
CTGATCATGG CGGGTATCGG TATCTACAGC TATCAAAAGC TGCCCATCGA TGCGGTACCC
GATATCACCA ACGTCCAGGT GCAGATCAAC ACTGCAGCGC CTGGTTACTC GCCCTTGGAA
ACCGAACAAC GGATCACGTT TCCAGTTGAA ACGGCCATGG CCGGTCTCCC GGGCCTTCAG
CAGACCCGTT CCCTGTCTCG CTCTGGCCTG TCTCAGGTCA CCGTGATCTT CAAGGATGGC
ACTGACATCT TCTTTGCCCG CCAGTTGATC AACGAGCGGC TGCAGGTTGC GAAGGAACAG
CTGCCAGAAG GTGTAGAGGC CGTCATGGGT CCGGTATCTA CCGGCCTCGG CGAGATCTTC
CTGTGGACTG TTGAAGCCGA AGATGGCGCG GTCAAAGAGG ACGGTACGCC GTACACCCCG
ACCGACCTGC GCGTGATCCA GGACTGGATC ATCAAGCCTC AGCTGCGTAA CGTCCCGGGT
GTGGCCGAGA TCAATACCAT CGGCGGTTAT GCCAAGCAGT TCCTGGTTGC GCCGGATCCA
AAGCGCCTGG CTACCTACAA GCTGACACTC AATGACCTGG TCGCAGCGTT GGAAAGTAAC
AACGCCAACG TCGGTGCCGG CTACATCGAG CGTAATGGTG AACAGTTGCT CATCCGTGCA
CCGGGTCAGG TAGGCAATAT CGAAGACATC GCCAACATCG TGATCACCAG TGTGGATGGT
GCACCGATTC GCATCAGCAG CGTTGCTGAC GTCAGCATCG GTAAAGAGCT CCGTACAGGT
GCTGCTACTG AGAACGGCCG CGAAGTCGTG CTCGGTACCG TGTTCATGCT GATTGGTGAA
AACAGCCGCA CCGTATCTCA AGCTGTCGCC GCCAAATTGG CGGACATCAA CCGCACCCTG
CCAAAGGGCG TGGTGGCTGT GACTGTTTAC GACCGTACCA ACCTGGTTGA AAAAGCCATC
GCGACGGTGA AGAAGAACCT GGTGGAAGGC GCGATCCTGG TTATCGCCAT TCTGTTCCTG
TTCCTCGGCA ACATCCGTGC GGCTCTGATC ACCGCGATGG TGATTCCGCT GTCCATGCTG
TTCACCTTCA CAGGCATGTT CAACAACAAG GTCAGTGCCA ACTTAATGAG TTTGGGGGCA
CTCGACTTCG GCATCATCGT CGACGGTGCC GTGGTTATTG TAGAAAACGC GATCCGTCGA
CTGGCTCATG CGCAACATAA GCATGGCCGC ATGCTCACCA AAACCGAACG CTTCCACGAG
GTCTTTGCCG CGGCGCGAGA AGCTCGCCGG CCGCTGATCT TCGGTCAGCT GATCATCATG
GTGGTGTACC TGCCGATCTT CGCCCTCACC GGCGTCGAAG GCAAAATGTT CCACCCGATG
GCCTTCACCG TTGTGATGGC GCTGCTGGGT GCAATGGTCC TGTCCGTTAC CTTTGTTCCT
GCAGCTATTG CCATGTTCGT CACTGGCAAG GTGAAGGAAG AGGAAGGCGT GGTCATGCGC
ACAGCTCGAC TGCGCTATGA ACCGGTTCTG CAATGGGTGC TGGGACATCG GAACATCGCT
TTCTCGGCCG CAGTAGCCTT GGTCGTGCTC AGTGGTTTGC TGGCAAGTCG TATGGGTAGC
GAGTTCATCC CAAGCCTCAG TGAGGGTGAC TTTGCGATGC AGGCCATGCG TGTGCCTGGA
ACGAGCCTCA CTCAATCTGT CGAGATGCAG CAGCGTCTGG AGAAAGCGGT GATTGCGCAG
GTGCCTGAAG TTGAGCGGAT GTTCGCACGC TCGGGTACCG CAGAAATTGC ATCTGACCCG
ATGCCGCCGA ACGCCTCTGA CGCCTACATC ATGCTCAAGC CTCAGGATCA GTGGCCTAAC
CCGAAGAAGC CTCGTGATGA GCTGATTGCT GAAGTGCAGA AGGCCGCAGC GGGTGTTCCA
GGAAGCAACT ACGAGTTGTC GCAGCCAATC CAACTGCGTT TCAACGAGCT GATTTCGGGC
GTGCGTAGTG ACGTCGCTGT GAAAGTCTTC GGCGATGACA TGGACGTGCT CAACAACACC
GCCAACAAGA TCGCGGCAGC GCTCAAAGCG GTCCCGGGCT CATCGGAAGT GAAAGTTGAG
CAGACATCCG GCCTGCCGGT GCTGACCATC AACATTGACC GCGAAAAAGC AGCACGCTAC
GGCCTGAACA TCGCGGATGT TCAGAACTCG ATCGCTATCG CCGTGGGTGG CCGTCAGGCC
GGCACGCTGT ATGAGGGCGA CCGTCGGTTC GACATGGTAG TACGCCTACC AGAGACCGTT
CGCACCGACG TAGCGGGTAT GTCCAGCTTG CTGATCCCGG TACCTGCCAA TGCGGCACAG
GGTGCCAATC AGATCGGCTT CATCCCGCTG TCCCAGGTCG CCAATCTGGA CCTGCAACTG
GGCCCGAACC AAATCAGCCG CGAGAACGGC AAACGTCTGG TTATCGTCAG CGCCAACGTT
CGAGGCCGCG ATCTGGGGTC CTTCGTTGAG GAGGCGACCG CATCGCTGGA CAAGAAGGTG
CAAATCCCTG CGGGCTACTG GACGACTTGG GGGGGCCAGT TCGAGCAGCT GCAGTCGGCT
GCCAAACGCC TGCAGATCGT TGTTCCAGTC GCCTTGCTGC TGGTCATGAC CTTGTTGTTC
CTGATGTTCA ACAACCTGAA GGACGGCATG CTGGTCTTCA CCGGTATTCC ATTCGCACTC
ACCGGTGGTG TTGTGGCGTT GTGGCTGCGG GACATCCCAC TGTCGATCTC GGCAGGTGTC
GGCTTCATTG CACTGTCCGG CGTTGCAGTA CTGAACGGCC TGGTGATGAT TGCCTTCATC
CGCGGGCTAA GGGAGGAGGG ACGAACGCTC AGACAGGCAG TCGATGAAGG TGCATTGACC
CGTCTGCGAC CTGTTCTGAT GACAGCCTTG GTAGCGTCCC TGGGCTTCAT CCCGATGGCT
TTGGCCACCG GCACCGGTGC CGAAGTTCAG CGGCCATTGG CGACGGTGGT GATTGGCGGG
ATCCTGTCCT CCACCGCACT GACCTTGCTG GTACTGCCTG CCCTGTATCA CTGGGCACAC
CGCAAGGATG AAGACGGCGA CGAGGCCGAA GTGGTTAGCT AA
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| Protein sequence | MFERIIRFAI EQRIVVMIAV LIMAGIGIYS YQKLPIDAVP DITNVQVQIN TAAPGYSPLE
TEQRITFPVE TAMAGLPGLQ QTRSLSRSGL SQVTVIFKDG TDIFFARQLI NERLQVAKEQ
LPEGVEAVMG PVSTGLGEIF LWTVEAEDGA VKEDGTPYTP TDLRVIQDWI IKPQLRNVPG
VAEINTIGGY AKQFLVAPDP KRLATYKLTL NDLVAALESN NANVGAGYIE RNGEQLLIRA
PGQVGNIEDI ANIVITSVDG APIRISSVAD VSIGKELRTG AATENGREVV LGTVFMLIGE
NSRTVSQAVA AKLADINRTL PKGVVAVTVY DRTNLVEKAI ATVKKNLVEG AILVIAILFL
FLGNIRAALI TAMVIPLSML FTFTGMFNNK VSANLMSLGA LDFGIIVDGA VVIVENAIRR
LAHAQHKHGR MLTKTERFHE VFAAAREARR PLIFGQLIIM VVYLPIFALT GVEGKMFHPM
AFTVVMALLG AMVLSVTFVP AAIAMFVTGK VKEEEGVVMR TARLRYEPVL QWVLGHRNIA
FSAAVALVVL SGLLASRMGS EFIPSLSEGD FAMQAMRVPG TSLTQSVEMQ QRLEKAVIAQ
VPEVERMFAR SGTAEIASDP MPPNASDAYI MLKPQDQWPN PKKPRDELIA EVQKAAAGVP
GSNYELSQPI QLRFNELISG VRSDVAVKVF GDDMDVLNNT ANKIAAALKA VPGSSEVKVE
QTSGLPVLTI NIDREKAARY GLNIADVQNS IAIAVGGRQA GTLYEGDRRF DMVVRLPETV
RTDVAGMSSL LIPVPANAAQ GANQIGFIPL SQVANLDLQL GPNQISRENG KRLVIVSANV
RGRDLGSFVE EATASLDKKV QIPAGYWTTW GGQFEQLQSA AKRLQIVVPV ALLLVMTLLF
LMFNNLKDGM LVFTGIPFAL TGGVVALWLR DIPLSISAGV GFIALSGVAV LNGLVMIAFI
RGLREEGRTL RQAVDEGALT RLRPVLMTAL VASLGFIPMA LATGTGAEVQ RPLATVVIGG
ILSSTALTLL VLPALYHWAH RKDEDGDEAE VVS
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