Gene PP_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0033 
Symbol 
ID1043513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp36198 
End bp37652 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content58% 
IMG OID637143405 
Productsugar transferase, putative 
Protein accessionNP_742203 
Protein GI26986778 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000504442 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGAACC TGAAGAACGA GAGGACGCTG TGGTGGGTCC TGGGTTCGAT TTTGCTATTG 
CGTTTGGTGG GGCTGGGCAT CTACCCGCTG ATGGACACAT CTGAGGCCCG TTACGCTGAA
ATGGCTCGCA AGATGGTCGA GTTGAATGAC TGGATCACGC CCATGTTCGA CTACGGGGTA
CCGTTCTGGG GCAAGCCTCC GTTGTCCTTC TGGACCCAGG CCGCGAGCAT GACGGTCTTC
GGCGTTAACG AGTTCGCTGC GCGCTTCCCA GCGTGGCTAC TCCACCTGGC AAGCTGTTTC
ATCATCATCA AACTCGGCAC GCAGCAGATT TCTCGTAACG CCGGCATCTG GGCTGCCATT
ATTTTTTCCA GCACCACACT TGGCCTGGTC TCCAGCGGTG TTGTGCTGAC TGACCCTGTT
TTGTCGTTCT CGATTCTGCT GGCCAGCTAC GGTTTCTGGC GTTGGATGAA GTGCGCCAGC
AAGGCGGATG CCTACCTGAT GTTCGCAGGT CTCGGGCTGG GCTTGCTTGC CAAAGGGCCG
CTGACCCTGG TGCTTATGGG GGCGCCGGCA TTCGCCTGGT TCGTTATCTA CAAGGAATGG
GGACGGGTAC TGAGGCTTCC CTGGATTAGC GGCCTTGTAC TCATGTTCGG TATATCCGTG
CCATGGTATG TCGCGGCCGA GATGAAAACG CCCGGCTTCA TGGAGTACTT CTTCGTTGGT
GAGCACTGGA GCCGCTACGT CGTCAGTAAC TGGGCAGGGG ACCTCTATGG TAGTGCTCAT
GCCAAGCCGT ACGGCAGCAT CTGGATCCAG CTCGGATTGT CGCTACTGCC ATGGGCCTTG
TTTCTACCAC TGTTGATCCG CAAGCGTGGA TCGATGCAGC GCTTCAAAGC CTACCTCTGG
CTGTGGGCCT TGGCGACACC GGTCTTCTTC ACATTTGCAG GCAACATTCT GTGGACCTAC
CTGCTACCCG CGCTGCCAGC GTGGGCATTG CTGCTGTCTG CACGGGTCAG CGAAGTTGGC
CCGAAGACCA CCTGGGCTGC CGCTGCGAGC GCATTGGTGT TGCCAATCAT CGGTGCGGGC
ATCATCTACG CCGGGGTACT AGAGGAGCGC CCTCAGAATC AGCGGGATGT GGTTCAAGCC
TGGCTCAATG TGCAGTCTGC TCATTCCGCT CCCCTGATCT ATCCTGGCCG CCGCTCATAC
TCGTCGGAGT TTTACAGCAG CGGGAAGTCC GAGAACATCA AGGATCCTGC CAAGTGGCCG
CGGGATGGCT CGTTCTATCT GTCCAGGCGC TTGCGAGACA GCAAGGATGG TCTGCCCGCT
GATCTAGCTT GCACATCGAT CACCGAAGCG AACGCCAGCC AGCTCCTGCT GTGCCATTGG
AAACGCCCCG CACAAGGTGC CGAGGGTCTG GCCGGAGAAA GCAATGCGGA AACGCCTCGC
AAGAACGAAG GCTAA
 
Protein sequence
MLNLKNERTL WWVLGSILLL RLVGLGIYPL MDTSEARYAE MARKMVELND WITPMFDYGV 
PFWGKPPLSF WTQAASMTVF GVNEFAARFP AWLLHLASCF IIIKLGTQQI SRNAGIWAAI
IFSSTTLGLV SSGVVLTDPV LSFSILLASY GFWRWMKCAS KADAYLMFAG LGLGLLAKGP
LTLVLMGAPA FAWFVIYKEW GRVLRLPWIS GLVLMFGISV PWYVAAEMKT PGFMEYFFVG
EHWSRYVVSN WAGDLYGSAH AKPYGSIWIQ LGLSLLPWAL FLPLLIRKRG SMQRFKAYLW
LWALATPVFF TFAGNILWTY LLPALPAWAL LLSARVSEVG PKTTWAAAAS ALVLPIIGAG
IIYAGVLEER PQNQRDVVQA WLNVQSAHSA PLIYPGRRSY SSEFYSSGKS ENIKDPAKWP
RDGSFYLSRR LRDSKDGLPA DLACTSITEA NASQLLLCHW KRPAQGAEGL AGESNAETPR
KNEG