| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0029 |
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| Symbol | czrR-1 |
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| ID | 1043508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 32893 |
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| End bp | 33567 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637143401 |
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| Product | DNA-binding response regulator CzrR |
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| Protein accession | NP_742199 |
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| Protein GI | 26986774 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000398254 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGCGTTC TAGTTGTGGA AGACGAAATT AAAACTGCCG AATATCTTCA GCAGGGCCTA
TCCGAAAGCG GGTATGTCGT AGATATCGTG CACAACGGTG TAGATGCTCT GCACTTGTTC
AACACTAATG TCTATTCGTT GGTCCTCCTG GACGTGAACC TCCCGGGTAT CGACGGCTGG
GACCTGCTGG AAACCATCCG TAAGACCAGC CGGGTCCGCA TCATCATGCT GACCGCCCGC
GGACGCATCA ATGACAAGCT CAAGGGCTTG GACGGCGGCG CGGATGACTA CCTTGTGAAG
CCATTCGAAT TCCCTGAGCT GCTTGCTCGC ATCCGTTCGC TGCAACGCCG TGGTGATGAG
TTAGTCGAGA AGAGCTCGCT GAAAATTGCC GATCTGGAAC TCGACTCCGT CCGCCATCGC
GTCTTCCGCG GTGGCACACG CATCGATCTC ACCACCAAGG AATTTGCGCT TCTGCACCTG
CTCATGAGCC GAACGGGCGA AGCGCTGACT CGCTCTCAGA TCATCTCGTT GGTCTGGGAT
ATGAATTTCG ATTGCGACAC CAATGTCATC GATGTAGCCA TCCGGCGCTT GCGCTCGAAG
ATCGATGACC CGTTTGAAAC CAAGCTCATT CACACGCTTC GTGGCGTTGG GTACGTTTTT
GAGGAACGCG CATGA
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| Protein sequence | MRVLVVEDEI KTAEYLQQGL SESGYVVDIV HNGVDALHLF NTNVYSLVLL DVNLPGIDGW
DLLETIRKTS RVRIIMLTAR GRINDKLKGL DGGADDYLVK PFEFPELLAR IRSLQRRGDE
LVEKSSLKIA DLELDSVRHR VFRGGTRIDL TTKEFALLHL LMSRTGEALT RSQIISLVWD
MNFDCDTNVI DVAIRRLRSK IDDPFETKLI HTLRGVGYVF EERA
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