Gene PP_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0021 
Symbol 
ID1043497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp25881 
End bp26804 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content53% 
IMG OID637143393 
Producthypothetical protein 
Protein accessionNP_742191 
Protein GI26986766 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.188544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000446047 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGTCT ATAAGGTCCG CATCGAAGAC ACAGAAAGCA AGATCATCGA CAAGGAAGGT 
TTCGAGGCCG AGACCTTCCG CAGAGATCCA TGGTACCAGC CTGGAAGTGC CGGCAAGCTA
GCTCAGTTTG CTGTATGCCC GGCATGCGAC AACCCTGTCC AGCTGGTTGG GCTGTATGAG
CTACCGCCTA ACGTGAAGAA CCCATTCGGG AAACATGCTA CTAAGAGCAT TCGCGGCATC
GCTCCATTTG ATAGTGAGGC CCGTAACGAT TGCCCGTACT TCCAGCCTCG CCAGCACAAG
AAAACAGAAC GAAAAACCAG GTTTGACGGC GTCCCACGGA AGATTCTCAA GCTATTGATC
GAACAGTTCG ATCGCGTGGT TTACATCCTG GAGAAAGAGA CCCAACTGGT CCTTTCCGAG
AACGCGTTGA GAGGCATGCT GCAGCGTTAC AAGGGAGAGC GTGGCTACCT CTATACCGGC
GCGACGCTTC GCAATGTGCC ATGGATCTTT GCTTACATGT CGGACGCCAC CCGCCTGTTT
GGCCAGAAGG TCATTGGAAA TGCTGAGCTG GTGAAAGCTA TTGCCGCTGA GGTGCCAGGG
GCGGAAATCA GCAGCACTGG TCGGCTGGAA TCGAAGAAGG TGCCTGGTTC GAAGGCGGCA
TATTTTGATC TCAAAATGAG TTTCATCCGC CATCGAATCG TCAAAGACAG TGAAGCGTCC
GGCTTGGTTG AAAGCATGGA GTTTGTAGTG TCACAGCCTC GCGGAGGTGA GCTTGAGCAC
ATTCACAAGG AAGTCATCAA ATTCGATTCG GCTTGGTTCG AATCCCTTAT CCGGATGCCG
GTTGATCATC CTTATCGCAG AATGGATAGA GTGAAGATGG CCCGGGAGGA ACTGGGCGAT
CTGCTGGAGC TGACTCAGGC CTGA
 
Protein sequence
MDVYKVRIED TESKIIDKEG FEAETFRRDP WYQPGSAGKL AQFAVCPACD NPVQLVGLYE 
LPPNVKNPFG KHATKSIRGI APFDSEARND CPYFQPRQHK KTERKTRFDG VPRKILKLLI
EQFDRVVYIL EKETQLVLSE NALRGMLQRY KGERGYLYTG ATLRNVPWIF AYMSDATRLF
GQKVIGNAEL VKAIAAEVPG AEISSTGRLE SKKVPGSKAA YFDLKMSFIR HRIVKDSEAS
GLVESMEFVV SQPRGGELEH IHKEVIKFDS AWFESLIRMP VDHPYRRMDR VKMAREELGD
LLELTQA