Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0020 |
Symbol | |
ID | 1043496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 24695 |
End bp | 25570 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637143392 |
Product | hypothetical protein |
Protein accession | NP_742190 |
Protein GI | 26986765 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0111189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000023208 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | TTGATTATGG CTGATACACC TGAGCAAGAG ATCGTAAGTG CCATTAGCGC TGCTGGTTGG CTGCAAGGAG ATACCGTCTC AGGTGACGCC TTGATTGAAC ACATATCCGA GGAGGTCCTG AAAGGCCAAT TCGAGGGGGT GGCTCCAGCT TATTGGATGT TGGCCTCCCA TTCCTGCACG GTGCATGCAC GCAACCTTTG TGATGCGCCG TGGATAGAGT GGATTGCCGT TAAGGTAAAG AAAAAGGCCT TTGATAAGCA GCTGCACGCC CTCAATCCAC GTACGCTGCA CCTGCAGCAC GCGGAAAAGC AGGTTTTGGA GCTCAAGATT CACAAGCGTG TGTGGACCAA GAGAGCCGTG CTTCCGACGC TCCACCGAAA TCCGGTAATC ACGCTGAGCG AAGAAAACGG TCAGTATTTC TCATACTGGA TGTCCCACCA TTACAACCGT ATTGCGATGC CGGACGAGTT GGTCAACCGC CTGAAGGCAG ACCAAGGTGA CGACGGCATG AAGGGCATCG CCGTGCTTGT CGACGATTTC CTCCATCAGA ACAACCAATT TTTCGCTAGT GCTTGGGTTT CCTTCAACCC CAAGGGCGAG ATTCGCGACC CGGCTGAGCC CTACGAGGTG GTGTTCCGGT TTTTGACCAA ACGAGAGCAC GCCAGGCGCG CAAATGAGCT GCACGACCAG CTGAATGAAT TGCTCGGGGT GGCCAGAAAT CTCAACGATG GGCTGTACTT CGGTGGAGCA GACGTCACGG TGCTCCAAGA CTTTACCATG CTCGATGCGG AAGACTTCGT GCGGTACAAC CTTCACGACT GGCTCAGTGT TGGGGATACC GATGAAGATG AAGAAGGTGC CGATGATGCT GACTGA
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Protein sequence | MIMADTPEQE IVSAISAAGW LQGDTVSGDA LIEHISEEVL KGQFEGVAPA YWMLASHSCT VHARNLCDAP WIEWIAVKVK KKAFDKQLHA LNPRTLHLQH AEKQVLELKI HKRVWTKRAV LPTLHRNPVI TLSEENGQYF SYWMSHHYNR IAMPDELVNR LKADQGDDGM KGIAVLVDDF LHQNNQFFAS AWVSFNPKGE IRDPAEPYEV VFRFLTKREH ARRANELHDQ LNELLGVARN LNDGLYFGGA DVTVLQDFTM LDAEDFVRYN LHDWLSVGDT DEDEEGADDA D
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