Gene PP_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0016 
Symbol 
ID1043492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp20198 
End bp22114 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content55% 
IMG OID637143388 
Producthypothetical protein 
Protein accessionNP_742186 
Protein GI26986761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.490672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000381885 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTTTGGTC TTTTAATCAA CCCACGACCA CACCAAGACG AAAGTCTTTT GGGGTACCTG 
CAGCGCCTGG CGAAAGCCAA CGGATTACCC AGAAAGGAAC TGCTCACCGC CTTTGCACGA
GCCGACGAGA CCGATGTTGC GGACTGGCTG CAGATGATGG AAGGACCACT GAGCTGGCCT
GCGGTATCTG CTGAGTTTCG TGATCCAAGG CCCAAGGGGG TCAAGTTATG GACGACTCAT
CACGCTCGTT ACTGTCCGAT CTGTTTGGGC GAAGCCGGTT ATTGGAGAGA AAGCTGGGGC
TTGACCCTGG TTACGACGTG TTCTGTCCAC GGCACTGAAC TCCACGGGCG GTGCCCCAAC
TGTCTGAAGG AAACCGATCC AAGCGCAATG AGTGCGAATA GTTGCCAAGC GTGTGGCACC
TCATTGAGTG GGACCAATTT TGAGATCGCG CCGGCGAGTG ATACGGCCGC CTGGCTCACC
TCTGGCTTTG AAGATAGGTT TTACGCCGAC TCGTTGCCAG CTGACGCGGG ATTGGCGGCC
CTCACCTACG AACAGTTTCA CGAGTTGTCA TCGCGTCTCG CTGTCAGAAG TTTGCCTACG
GAAAGAACCC AGCCGCTGAA GGTTGCTGAT TCGGGTTCGC TAGAGATATC GCGGCTTATG
GCAAACGCGG CGGGCGTGGT TCTCATGAAC TGGCCTCTCG CATTCAGAGA ACTGCTGAGT
GGCCTCAAGG CAGTCCATTC CGATAACGAA CATTGGACGC TCAGCAGATC GTTCGGCCCG
ATATACCACG ACATCCACCG TGATCTGGAT GACTCTTGTT TTGACTTTCT TCGTCGAGAG
TTCGAATCAT TTCTGCAGCA TGCGTGGGAA GCACCGTTAG CGAAGCGAAA TCGCAATTTG
AGTGAGGAGA CGATTGAGAG ACATCGTTGG GTGTCGTTCG ATTCTGCTGC TGAAGCTTGT
GGTCTCGGGG TATCAGTCAT AAAACGCCTT CATCAGGAGG GACAAATCGC CTATCGGGAG
AAGGTCCATG AAGATCGAGT CTTTACGGTC GTGGACCTGG ATCATTTGAA GGCAATCTCG
CAGCATCTCC AGGGCGTGGC TGATATGAAA GAAACCTCGA CTTTGCTAAG CCTCTGTCGC
AATCGGGTTA GGCAGCTGCT AGCTGGTGGT ACCCTCCAGT TCTTTGGTGG AGAACCGCGC
CCAGGCGAAA GGTGGCTGAT TGACTGCCGC TCGATCAACG AATTGATTGA TGAGAAGCTG
CCTACCAGCT CTGACCAGAG CCTGGTGTCG ATCAACTACT TGGCCAAGCA TTCTCTGCCC
AAGGGGGGTG GGTTGGTCGA GTTGGTTCAG GCAATACGTG CAGGTGAACT TCGCGCTTAC
GGCCCAGCTG AGAATGGCTC GGTTGCGGTA GGGGCGTGGT TACTCAAGCC GCAAGATTTT
GCAGCGTGGC AACAAGCCCG AGCTGAGAAC AAGAGTCCGG TCTTTCCCGG CCTGTCGGTA
GTCAAGGCTG CTGCGCTGTT AGGCGTCAAA GAACAATGCG CATACGCGTT CGTTCGACTG
GGTCTGCTAT GGAGCACTGC TGTCGAACGA GGCCGGCGTA CGCAATTGAT GGTTAAGCCT
CAAGCCATCG ACAGATTCAG GCGTGGCTAT ATCTTGGGAC CGGAGATTGC GGTGTATTTG
GGGAAGTCGA CCAGGGAGGC GTTCAAGCAC CTTTGGGAGG CCAGGTTTCG CCCCGTTGCG
GGGCCATCCA TTCCAAACGC GGCTTGCCGG CAGTACGTTT GGGTAAGAAG CAAAAAGCTG
ATCGATTACC TCGCAAGTGA AGCCGCCCAG ATCGACGATC CTGAAGCCAT CACGTTTTTA
TCCACACCGA TCGCTCAGCC TCGTGATTGC CGATTCAGGC ATGTGGGATC AAGATAG
 
Protein sequence
MFGLLINPRP HQDESLLGYL QRLAKANGLP RKELLTAFAR ADETDVADWL QMMEGPLSWP 
AVSAEFRDPR PKGVKLWTTH HARYCPICLG EAGYWRESWG LTLVTTCSVH GTELHGRCPN
CLKETDPSAM SANSCQACGT SLSGTNFEIA PASDTAAWLT SGFEDRFYAD SLPADAGLAA
LTYEQFHELS SRLAVRSLPT ERTQPLKVAD SGSLEISRLM ANAAGVVLMN WPLAFRELLS
GLKAVHSDNE HWTLSRSFGP IYHDIHRDLD DSCFDFLRRE FESFLQHAWE APLAKRNRNL
SEETIERHRW VSFDSAAEAC GLGVSVIKRL HQEGQIAYRE KVHEDRVFTV VDLDHLKAIS
QHLQGVADMK ETSTLLSLCR NRVRQLLAGG TLQFFGGEPR PGERWLIDCR SINELIDEKL
PTSSDQSLVS INYLAKHSLP KGGGLVELVQ AIRAGELRAY GPAENGSVAV GAWLLKPQDF
AAWQQARAEN KSPVFPGLSV VKAAALLGVK EQCAYAFVRL GLLWSTAVER GRRTQLMVKP
QAIDRFRRGY ILGPEIAVYL GKSTREAFKH LWEARFRPVA GPSIPNAACR QYVWVRSKKL
IDYLASEAAQ IDDPEAITFL STPIAQPRDC RFRHVGSR