Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0014 |
Symbol | |
ID | 1043490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 17133 |
End bp | 19166 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637143386 |
Product | transposase, putative |
Protein accession | NP_742184 |
Protein GI | 26986759 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.285018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000281565 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | TTGGGGTGGT GGGCATTGAC CTTGATAGGT CAATTGACAC TGACTCCCCG GTCTTCCTGC AAGGGGGGCA CCGTCATGCA AACCTTTTCC CTTAGGGTGA AATTGGTCGT CATCGTTCGT GGCGTACTGA TGGTGCTTGA GAAGAGGCTT ATTGACCGGA AGCTGCTCTT TTTCGATGAG CTTGGTGAGC CCACGAAGCT ATCCGAGAAG GAGTTCTATG AGGCCTACGA GAAGCGCGAG ATCGAGATCT CCGCTGATCA GCCATACCTT GGGAAGGTTC CGTATGTGCG GAACGTCCCT CCAGATATTT CATGCTTCCC CAAAAAACAT GGAGATGAGG CATTGCGTCG ACGCAAGTAT CTGGACGACC TAACTAAGCG CGGTAAATAC AAGCTACCGG GTGACGAAGA CATGATCAAG AAACTTAGAG ATATCGCCAA AAAGATTGGG GATGCGTGCG CACCCTCGGT TTCCACTATT CGACGTTGGG CAGCCAAATA CATTGGCCAG AACGTAGTAA AGCTTATCCC TCAGCATGCC AAAAAGGGTC GGGCTGCCGC GATACAGGGA GAGCTCGAAG TTATTCTTGA AGGGGTGATT AATAAAACCT ACCTGCAGGA TACGATTCCA GCGGTCAGCG TGGTCGTTTC AGAATTCGAA GATCAGATAA AAGAGAGGAA CAAAAGTCGT TTGCCTTCGG ATCAGCTCAA GATCCCAAGC GGAATGACTG TCCGAAGGTA CATCGCCAAG CTGGATCCGT ACCTTGTGGA TAAGGAGAGG CTCGGAAAAC ACGCAGCAGA CAAGAAGCAC CGTGTTGCGG CGGGTGTCCT ACGTGTCCAT GAGATTTTGG AACGTTGGGA AATTGATCAC ACCTTGTTGG ACGTCCAGCT TGTGGATGAA ACCTCGGGGC TGTGCATTGG GCGCCCCTAT CTGACGATCG TCCTCGACCG CTTCTCTCGA ATGGTGATGG GATATTTGCT CCACCTGTCG GCGCCAAATA CGGAAACCGT GCTTCGTGTG ATCGAACGCT CAATCCGTCC AAAAGCCGAA TTGCTGAAGC GCTTTCCGAA AGTGAGAAAT GAATGGTGGG CACGTGGGCT GCCGGCTCGA ATAGTCCCAG ACAACGCAGC GGAATTTCAC GCGGGCGATC TCATCATGGG ATTCAACGAG TTGGGTATCG AGATCATGTA TCCCGCTTCA AGGGCCCCTC AAAGGAAAGG TGCCGTCGAA CGCTTTTTCA GCACACAGAA CCTGGGGCTT ATCCACAACC TCCCGGGTAC CACCTTCTCG AATATCCAGC AGCGTGGCGA TTACGACTCG GAGAAGAATG CATGTTTCAC GCTCCCTCAA TTGGAGGCGG TGGTAGTGAA ATGGATCGTC GATGGTTACC ACCAGACTCC TCATCGGGGG CTGGACAACA GAACACCGGC TCAAGTCTGG GGGACTAGCG AGGCGAACCA TGTCATCAGC CTTCCCGTCG ACCTGGACTC GTTGGAGTGC ATTCTGGCCA AGCGGGCCTC GGTGAAGGTT CACCATTACG GCATCGAGGT TGCCAAAGTG GGCTACCACT CTACGGAACT TGCTGAGCTC CGTATGCGTT TGGCAGACGG AGAAAAGGTA AACGTCCGCT ATCGAGACGA AGCCGGGCAC GTTTGGGTTC ACGACCGCTT CAGAAACTTG TTCTTCAAAG TGCCCGCCAA AGATGAGCGA ATGGCCGGTA AGAGCAGGGA GGTGTGGAAG GCTGCCGAGA AAGCGCTGCG AGAAAAATAT AATGAGCAGC CTAGCTTCGA GGCTACGCAC AGGTGCTACC AGGAAATTAT GGAAGATGCA GACGAGGCCC GCCGTTCGCA GACGCTCAGA AAACGACGCG CAGCTGCCAT AGCGAAAATC GACAAGGAGG GTCGAGTGAC CGAAAGCACG CCTCCACCCA AGGTACTCGC TGAAGTGGAA TGGACCGGTG ACTCTATTCC TAACATTCCG CCAGCAGCCT TCAAGGTCTC GGTTCGTCGC CCTGCTGGGA GTTCTAAGCC ATGA
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Protein sequence | MGWWALTLIG QLTLTPRSSC KGGTVMQTFS LRVKLVVIVR GVLMVLEKRL IDRKLLFFDE LGEPTKLSEK EFYEAYEKRE IEISADQPYL GKVPYVRNVP PDISCFPKKH GDEALRRRKY LDDLTKRGKY KLPGDEDMIK KLRDIAKKIG DACAPSVSTI RRWAAKYIGQ NVVKLIPQHA KKGRAAAIQG ELEVILEGVI NKTYLQDTIP AVSVVVSEFE DQIKERNKSR LPSDQLKIPS GMTVRRYIAK LDPYLVDKER LGKHAADKKH RVAAGVLRVH EILERWEIDH TLLDVQLVDE TSGLCIGRPY LTIVLDRFSR MVMGYLLHLS APNTETVLRV IERSIRPKAE LLKRFPKVRN EWWARGLPAR IVPDNAAEFH AGDLIMGFNE LGIEIMYPAS RAPQRKGAVE RFFSTQNLGL IHNLPGTTFS NIQQRGDYDS EKNACFTLPQ LEAVVVKWIV DGYHQTPHRG LDNRTPAQVW GTSEANHVIS LPVDLDSLEC ILAKRASVKV HHYGIEVAKV GYHSTELAEL RMRLADGEKV NVRYRDEAGH VWVHDRFRNL FFKVPAKDER MAGKSREVWK AAEKALREKY NEQPSFEATH RCYQEIMEDA DEARRSQTLR KRRAAAIAKI DKEGRVTEST PPPKVLAEVE WTGDSIPNIP PAAFKVSVRR PAGSSKP
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