| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0013 |
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| Symbol | gyrB |
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| ID | 1043489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 13330 |
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| End bp | 15750 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637143385 |
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| Product | DNA gyrase subunit B |
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| Protein accession | NP_742183 |
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| Protein GI | 26986758 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.571026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000003087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGCGAAA ATCAAACGTA CGACTCCTCC AGCATCAAGG TGCTGAAAGG TTTGGATGCC
GTACGCAAGC GTCCCGGCAT GTACATTGGC GACACCGATG ATGGTAGTGG CCTGCACCAC
ATGGTCTTCG AGGTGGTCGA CAACTCGATC GACGAAGCCC TCGCCGGTCA CTGCGATGAC
ATTACCGTCA TCATCCACCC GGACGAATCT ATCAGTGTGC GCGACAACGG TCGCGGCATT
CCGGTCGATG TGCATAAGGA AGAAGGCGTT TCCGCAGCCG AGGTCATCAT GACTGTGCTG
CACGCCGGCG GTAAGTTTGA CGACAACTCC TACAAAGTAT CCGGCGGTCT GCACGGTGTA
GGTGTGTCGG TTGTGAACGC CCTGTCCGAG AAGCTGGTTT TGACTGTTCG CCGTAGCGGC
AAGATCTGGG AACAGACTTA CGTTCACGGT GTTCCACAAG CGCCCATGGC GGTTGTCGGT
GACAGTGAAA CCACGGGTAC CCACATCCAC TTCAAGCCAT CGGCTGAAAC CTTCAAGAAC
ATTCACTTCA GCTGGGACAT CCTGGCCAAG CGCATCCGCG AGCTGTCGTT CCTCAACTCG
GGCGTTGGCA TTCTGCTGAA GGATGAGCGC AGCGGTAAGG AAGAGTTCTT CAAGTACGAA
GGCGGTCTGC GTGCGTTCGT CGAGTACTTG AACACCAACA AGACGCCGGT CAACTCCCAG
GTGTTCCACT TCAACGTTCA GCGTGACGAT GGCGTGGGTG TTGAAGTCGC CCTGCAATGG
AACGACAGCT TCAACGAAAA CCTGCTGTGC TTTACCAACA ATATTCCGCA GCGTGATGGC
GGTACCCACC TGGTGGGTTT CCGTTCCTCG CTGACCCGTA GCCTTAACAG CTACATCGAG
CAGGAAGGCC TGGCCAAGAA GAACAAGGTG GCAACCACTG GCGACGACGC CCGTGAAGGC
CTGACCGCGA TCATCTCGGT GAAGGTACCG GACCCGAAGT TCAGCTCGCA GACCAAGGAC
AAGCTGGTCT CCTCGGAGGT GAAAACCGCC GTGGAACAGG AGATGAACAA GTACTTCGCC
GATTTCCTCC TGGAAAACCC GAACGAGGCG AAGGCCGTCG TTGGCAAGAT GATCGACGCC
GCTCGCGCCC GTGAAGCCGC CCGTAAAGCC CGTGAGATGA CCCGCCGTAA AGGTGCGCTG
GATATCGCGG GTCTGCCGGG CAAGCTGGCC GACTGCCAAG AGAAGGATCC TGCTCTCTCC
GAACTGTACC TGGTGGAGGG TGACTCCGCG GGTGGCTCGG CCAAGCAAGG CCGCAACCGT
CGTACCCAGG CGATCTTGCC GCTGAAGGGT AAAATCCTCA ACGTCGAGAA AGCGCGCTTC
GACAAGATGA TTTCGTCCCA GGAAGTGGGC ACGCTGATCA CTGCGCTGGG CTGTGGCATC
GGCCGCGAAG AGTACAACAT CGACAAACTG CGTTATCACA ACATCATCAT CATGACCGAT
GCTGACGTTG ACGGTTCGCA CATCCGTACG CTGCTGCTGA CCTTCTTCTT CCGTCAGCTG
CCGGAGCTGG TCGAGCGTGG CTACATCTAT ATTGCCCAGC CGCCGCTGTA CAAGGTGAAA
CGAGGCAAGC AGGAGCAGTA CATCAAGGAC GATGAGGCCA TGGAAGAGTA CATGACCCAG
TCGGCTCTGG AAGATGCCAG CCTGCACCTG GACGAATCGG CGCCAGCAGT TTCCGGCGTG
CAGCTGGAAG CGCTGGTGAA TGAGTTCCGT AGTGTCATGA AGACTCTCAA GCGCCTGTCG
CGCTTGTACC CGGAAGAGCT GACCGAGCAC TTCGTCTACC TGCCTGAGGT GACCCTGGAG
CAGTTGGGTG ACCACGCAGT GATGCAGGCC TGGCTGGCCC AGTTCCAGGC GCGTCTGAAC
TCCAGCCAGA AGTCTGGCCT GGCTTACAAC GCCAGCCTGC GTGAAGACAA AGAGCGCAAC
GTATGGCTGC CTGAAGTGGA AATTACCTCT CACGGTCTGG CCAGCTACAT CACCTTCAAC
CGCGATTTCT TCGGCAGCAA TGACTACCGT ACCGTAGTCA ACATTGGTGC CAAGCTTTCG
AGCCTGTTGG GTGAAGGTGC GTACGTGCAG CGCGGTGAAC GCCGCAAGGC AATCGTCGAG
TTCAAAGAGG GCCTGGATTG GCTGATGAAC GAGACCACCA AGCGCCATAC GATTCAGCGA
TACAAAGGGC TGGGTGAGAT GAACCCGGAT CAACTGTGGG AAACCACCAT GGACCCGACC
GTTCGCCGTA TGCTCAAGGT CACGATCGAA GATGCTATCG CCGCTGACCA GATCTTCAAC
ACCCTGATGG GTGATGCGGT CGAGCCGCGT CGTGACTTCA TCGAAAGTAA CGCGCTGTCG
GTGTCGAACC TGGACTTCTG A
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| Protein sequence | MSENQTYDSS SIKVLKGLDA VRKRPGMYIG DTDDGSGLHH MVFEVVDNSI DEALAGHCDD
ITVIIHPDES ISVRDNGRGI PVDVHKEEGV SAAEVIMTVL HAGGKFDDNS YKVSGGLHGV
GVSVVNALSE KLVLTVRRSG KIWEQTYVHG VPQAPMAVVG DSETTGTHIH FKPSAETFKN
IHFSWDILAK RIRELSFLNS GVGILLKDER SGKEEFFKYE GGLRAFVEYL NTNKTPVNSQ
VFHFNVQRDD GVGVEVALQW NDSFNENLLC FTNNIPQRDG GTHLVGFRSS LTRSLNSYIE
QEGLAKKNKV ATTGDDAREG LTAIISVKVP DPKFSSQTKD KLVSSEVKTA VEQEMNKYFA
DFLLENPNEA KAVVGKMIDA ARAREAARKA REMTRRKGAL DIAGLPGKLA DCQEKDPALS
ELYLVEGDSA GGSAKQGRNR RTQAILPLKG KILNVEKARF DKMISSQEVG TLITALGCGI
GREEYNIDKL RYHNIIIMTD ADVDGSHIRT LLLTFFFRQL PELVERGYIY IAQPPLYKVK
RGKQEQYIKD DEAMEEYMTQ SALEDASLHL DESAPAVSGV QLEALVNEFR SVMKTLKRLS
RLYPEELTEH FVYLPEVTLE QLGDHAVMQA WLAQFQARLN SSQKSGLAYN ASLREDKERN
VWLPEVEITS HGLASYITFN RDFFGSNDYR TVVNIGAKLS SLLGEGAYVQ RGERRKAIVE
FKEGLDWLMN ETTKRHTIQR YKGLGEMNPD QLWETTMDPT VRRMLKVTIE DAIAADQIFN
TLMGDAVEPR RDFIESNALS VSNLDF
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