Gene PP_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0009 
SymbolrpmH 
ID1043485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp8812 
End bp8946 
Gene Length135 bp 
Protein Length44 aa 
Translation table11 
GC content59% 
IMG OID637143381 
Product50S ribosomal protein L34 
Protein accessionNP_742179 
Protein GI26986754 
COG category 
COG ID 
TIGRFAM ID[TIGR01030] ribosomal protein L34, bacterial type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00002417 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACGTA CTTTCCAACC AAGCACCATC AAGCGCGCCC GCACCCACGG TTTCCGTGCC 
CGTATGGCTA CCAAGAACGG CCGTGCTGTT CTGTCGCGTC GTCGTGCCAA AGGCCGTAAG
CGTCTGGCCA TTTGA
 
Protein sequence
MKRTFQPSTI KRARTHGFRA RMATKNGRAV LSRRRAKGRK RLAI