| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0004 |
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| Symbol | gidA |
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| ID | 1043472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2486 |
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| End bp | 4381 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637143376 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | NP_742174 |
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| Protein GI | 26986749 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000252257 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGTGGATT TCCCTTCCCG TTTTGACGTG ATCGTCATCG GCGGCGGCCA TGCCGGTACC
GAGGCTGCGC TTGCGTCTGC ACGCATGGGT GTGAAAACCC TGCTGCTGAC CCATAACGTG
GAAACCCTCG GTCACATGAG CTGCAACCCC GCCATCGGCG GTATTGGCAA AAGCCATCTG
GTCAAAGAGA TCGATGCGCT CGGCGGCGCC ATGGCGCTGG CCACCGACAA GAGCGGCATC
CAGTTCCGCG TTCTGAACAA CCGCAAGGGC CCGGCCGTAC GTGCCACCCG TGCGCAAGCC
GACCGCGCCA TCTACAAGGC AGTGGTACGT GAAATCCTGG AAAACCAGCC AAACCTGTGG
ATATTCCAGC AGTCCTGCGA CGACCTGATC GTCGAGCAGG ACCAGGTCAA AGGCGTGGTG
ACCCAGATGG GCCTGCGTTT CTTTGCCGAA TCTGTGGTGC TGACTACCGG TACCTTCCTC
GGCGGCCTTA TCCACATTGG TCTGCAAAAC CATTCCGGTG GTCGCGCCGG TGATCCACCT
TCGATTGCCC TGGCCCACCG CATGCGTGAA CTGCCGTTGC GCGTCGGCCG CCTGAAAACC
GGTACCCCGC CACGCATTGA CGGCCGCTCG GTGGACTTCT CGGTAATGAC CGAACAGCCA
GGCGATACGC CGATCCCGGT GATGTCGTTC ATGGGCAATG CCGAAATGCA CCCGCGACAG
GTGAGCTGCT GGATTACCCA CACCAATGCG CGCACCCACG AGATCATTGC GTCGAACCTC
GACCGTTCAC CGATGTACTC GGGCGTGATC GAAGGTGTCG GTCCGCGCTA CTGTCCGTCT
ATCGAAGACA AGATCCACCG CTTTGCCGAC AAGGAAAGCC ACCAGGTGTT CATCGAGCCG
GAAGGCTTGA ACACCCATGA GTTGTATCCC AACGGTATTT CCACTTCGCT GCCGTTCGAC
GTGCAGTTGG AGCTCGTGCG TTCCATCCGT GGCATGGAAA ACGCCCACAT CGTGCGCCCC
GGCTACGCCA TCGAATACGA CTACTTCGAT CCCCGCGACC TCAAGTACAG CCTCGAGACG
AAAGTCATCG GCGGCCTGTT CTTCGCCGGG CAGATCAACG GCACCACCGG GTACGAAGAA
GCCGGCGCCC AGGGCCTGCT GGCCGGGACT AACGCCGCAC TTCGGGCGCA GGGCCGTGAC
AGCTGGTGCC CGCGCCGCGA CGAGGCATAC ATCGGCGTAC TGGTGGACGA CCTGATTACC
TTGGGTACTC AGGAGCCGTA CCGCATGTTT ACCTCGCGTG CCGAGTACCG GCTGATACTG
CGCGAAGACA ACGCCGACCT GCGCCTGACC GAAAAGGGCC GTGAACTGGG CCTGATCGAT
GACCAGCGCT GGGCCGCATT CTGCGCCAAG CGCGACGGTA TCGAGCGTGA GGAACAGCGC
CTGAAATCGA CCTGGGTTCG GCCCAATACC GAGCAAGGCC AGGCCATTGT GGATAAATTC
GGCACTCCGC TGAGCCACGA GTACAGCCTG CTCAACCTGC TGGCGCGCCC CGAAATCGAC
TACGCCGGCC TGATCGAAGC GACTGGCGGT GAAGCGATCG ATCCACAGGT TGCCGAGCAG
GTCGAGATCC GCACCAAGTA CGCCGGCTAC ATCGACCGCC AGCAGGATGA AATTGCCCGA
CTGCGCGCCA GCGAAGACAC ACGCCTGCCT GTGGATATCG ACTACACGAC GATTTCCGGC
CTGTCCAAGG AGATACAGGG CAAGCTGAGC CAGACCCGTC CGCAGACGCT GGGTCAGGCT
TCGCGTATCC CGGGTGTGAC CCCGGCGGCG ATTTCCCTGT TGCTGATTCA CTTGAAAAAA
CGCGGCGCTG GCCGCGAATT GGAGCAAAGC GCTTGA
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| Protein sequence | MVDFPSRFDV IVIGGGHAGT EAALASARMG VKTLLLTHNV ETLGHMSCNP AIGGIGKSHL
VKEIDALGGA MALATDKSGI QFRVLNNRKG PAVRATRAQA DRAIYKAVVR EILENQPNLW
IFQQSCDDLI VEQDQVKGVV TQMGLRFFAE SVVLTTGTFL GGLIHIGLQN HSGGRAGDPP
SIALAHRMRE LPLRVGRLKT GTPPRIDGRS VDFSVMTEQP GDTPIPVMSF MGNAEMHPRQ
VSCWITHTNA RTHEIIASNL DRSPMYSGVI EGVGPRYCPS IEDKIHRFAD KESHQVFIEP
EGLNTHELYP NGISTSLPFD VQLELVRSIR GMENAHIVRP GYAIEYDYFD PRDLKYSLET
KVIGGLFFAG QINGTTGYEE AGAQGLLAGT NAALRAQGRD SWCPRRDEAY IGVLVDDLIT
LGTQEPYRMF TSRAEYRLIL REDNADLRLT EKGRELGLID DQRWAAFCAK RDGIEREEQR
LKSTWVRPNT EQGQAIVDKF GTPLSHEYSL LNLLARPEID YAGLIEATGG EAIDPQVAEQ
VEIRTKYAGY IDRQQDEIAR LRASEDTRLP VDIDYTTISG LSKEIQGKLS QTRPQTLGQA
SRIPGVTPAA ISLLLIHLKK RGAGRELEQS A
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