| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3466 |
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| Symbol | |
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| ID | 2686587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 3811508 |
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| End bp | 3813103 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637128161 |
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| Product | hypothetical protein |
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| Protein accession | NP_954506 |
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| Protein GI | 39998555 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.562042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAA GGGCTTTGAT AGCTGTTGTA CTATCCATTC TCTTCTTTTA CGGCTACACG
GCACTCTTTT CGCCGCCCCC GAAAGAAACA CCGAAGCCGG TTGCCACTGC GACGCAAAGC
CAGCCGGCTC AGCAGGTGAC TGCCGCACCG GTTCCCGTGG CTGTTCCCGC TCAGCCTCAA
CCGGCTGTTG CCGCCAGGGA CGTGTCGGTC GACACTCCTG CCTATTCGGT GACGTTTTCC
ACCCAGGGCG GGAGTATTAA GCGCCTCGAT CTGAAGCGGT ATCATGAGAC GGCTGGTCCG
GGCGGCAAGA ACGTCACGCT GGTTTCCGAG GACAATCCGT CGAATTACAC CATTGGCCTC
CGCGCTCCCG GTTTCGGTCT TGACCAGAAT GCAGTCTTTG TCCCGAGTGC CGACGCACTC
ACCGTAGGAC CCGGCGAGAA GAAGCAGCTT TCCTTCACCT GGGTTTCGCC GGCCGGCGTC
ACGGTGACAA AGACATATAA CTTTTCCGGT GACGGCTACG GGCTGGAGAT ACAGTACCAG
GTCACCAACA GCGGCAGCGC TCGCGTATCC TCGCCTGTTC AGACGGTCCA GACCTATCCC
CTTGTGCCAA AGGTCAAGGA GAGCAGGTTT GAGACCTTCG GACCGGCGAC CTTTGCCCAG
GACAAACTGT TTGAGGACAA GGTGAAGGAC CTGGAGTCGG GCGCAAAGAC TCATGCGGCT
CCGCTCTGGT CCGGATTCGC TGACAAGTAC TTCCTCTCTG CCGTACTGGC TCACGAGGGT
AGTATGGCGG CAGCAACCAT CCGCAAGACA GCCTCGGGTT ATCTGGAGAA CACCATCTCT
TCACCTGAAC TGTCCCTTAA CCCCGGTGAG GGCCGGGCGC TTACCTATCG TCTTTTCTTC
GGGCCCAAGG ATATCGATGT TCTCAAGGCA CAGGGCAACA GCCTGGAGCG GGCGATCAAC
CTGGGCTGGT TCGCGATGCT GGCTAAGCCC CTTCTCCACA GTCTCAAGTT TTTCCACAAC
TACACCGGGA ACTACGGGAT AGCCATTATC ATCATCACGG TTATCATAAA GGTTATCTTC
TACCCGCTAA CCCACTCCAG CTACAAGTCC ATGAAGGAGA TGCAGAAGCT CCAGCCGAAG
ATGCAGCAGT TGCGCGAAAA GTACAAGAAT GACCGTGAGG CCATGAACCG CGCCATGATG
GAACTGTACC AGACCCATAA GGTGAACCCT GTGGGCGGGT GTCTCCCCAT GCTCGTACAG
ATTCCCGTCT TCTTCGCGCT CTACAAGGCG CTCATGTTCT CCATTGAGTT GCGCCACGCG
CCCTTCATGC TCTGGATCAC CGATCTGGCC GCCAAGGATC CCTACTACGT GACTCCCATC
ATCATGGGTG TGACAATGGT CATCCAGCAG AAGATGACGC CTTCCCAAAT GGATCCTGTG
CAGCAGAAGA TGATGATGGC GCTGCCGGTG GTCTTTACGT TCATGTTCCT CAACTTCCCG
TCGGGCCTTG TGCTTTACTG GCTCGTCAAC AACGTGCTTA CCATCATTCA GCAGTACTAC
ATCAACCGCA GCATCAGTAC GGCGGAGGCC AAGTAG
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| Protein sequence | MEKRALIAVV LSILFFYGYT ALFSPPPKET PKPVATATQS QPAQQVTAAP VPVAVPAQPQ
PAVAARDVSV DTPAYSVTFS TQGGSIKRLD LKRYHETAGP GGKNVTLVSE DNPSNYTIGL
RAPGFGLDQN AVFVPSADAL TVGPGEKKQL SFTWVSPAGV TVTKTYNFSG DGYGLEIQYQ
VTNSGSARVS SPVQTVQTYP LVPKVKESRF ETFGPATFAQ DKLFEDKVKD LESGAKTHAA
PLWSGFADKY FLSAVLAHEG SMAAATIRKT ASGYLENTIS SPELSLNPGE GRALTYRLFF
GPKDIDVLKA QGNSLERAIN LGWFAMLAKP LLHSLKFFHN YTGNYGIAII IITVIIKVIF
YPLTHSSYKS MKEMQKLQPK MQQLREKYKN DREAMNRAMM ELYQTHKVNP VGGCLPMLVQ
IPVFFALYKA LMFSIELRHA PFMLWITDLA AKDPYYVTPI IMGVTMVIQQ KMTPSQMDPV
QQKMMMALPV VFTFMFLNFP SGLVLYWLVN NVLTIIQQYY INRSISTAEA K
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