Gene GSU3423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU3423 
Symboltkt 
ID2688159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp3767539 
End bp3769545 
Gene Length2007 bp 
Protein Length668 aa 
Translation table11 
GC content70% 
IMG OID637128118 
Producttransketolase 
Protein accessionNP_954463 
Protein GI39998512 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0021] Transketolase 
TIGRFAM ID[TIGR00232] transketolase, bacterial and yeast 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCGG TAAGCCTTAC CAACGAAGAT GCCCGCCTGG GCGCCGATAC CCTCAGGATG 
CTGGCGGTGG ACGCGGTTGA AGCCGCCGCC TCCGGTCACC CGGGGCTGCC CATGGGGGCC
GCCGACTACG CCTTTCTCCT CTGGCACTCC CACCTCCGCT TCGACCCCGC CGACCCGGAG
TGGCCGGGGA GGGACCGGTT CATCCTCTCG GCGGGGCATG GTTCCATGCT TCTCTACGGT
CTGCTCCACC TCTTCGGCTT CGATCTTCCC CTGGATGAAC TGAAGCGGTT CCGCCAGTGG
GGGAGCCGCA CCCCGGGCCA TCCGGAATAC GGCCATACCC CCGGCGTGGA GGTGACCACC
GGTCCCCTGG GGCAGGGGTT CGCCATGGGG GTCGGCATGG CCCTGGCGGC GCGCATGGGC
TCGGCCCGCT TTGCCGACGA GCGGTTTGAT CCCTGCGCCC ACCACATCTA CGCCTTGGTG
AGCGACGGCG ACCTCATGGA GGGAGTCAGC CAGGAGGCGG CATCCCTGGC CGGTCACCTG
AAGCTCGGCA ACCTGGTCTA CCTGTACGAC GACAACCGGA TCACCATCGA GGGTTCCACG
GACCTCGCCT TTTCCGAAGA CACGGCGGGG CGCTTCGCGG CTCTTGGCTG GCACGTGCAG
GCCGTTGACG GCCACGATGT CCGCCAGGTG GACGAGGCCC TCTGGCGGGC CCGGGTGGAA
CGGGAGCGGC CCTCCCTCAT CATCGCCCGG ACCCATATCG CCCAGGGCTC GCCCGGCAAG
CACGACTCCG CCGCCGCCCA CGGCTCGCCC CTGGGTGCCG AGGAGGCCGC AGCCACGCGC
AGGAGCCTGG GGTGGCCCGA TGAGTTGTTT CACGTGCCGG AGCGGATTCG GGAGCTCTGC
GAACAGAGGC GGGAAGCGCT CGCCGAGGCG CGCGCCGCCT GGCAGGATGA GCTCCGCCGC
TGGCGCCGCC GCAATTCCGA CAAGGGACGG CTCTGGGATC TGATGGCGGA AAAGGGGGTG
CCCAGGGATC TGGAGTCCCG GCTGCTGGCG GCGGTGGGAG CCGAAGCCGG CGCCACGCGC
TCCCTTGCGG GCAAGGTCCT CCAGGCGGCC GCCGCCGTAG TGCCCTCCCT GGTCGGGGGC
TCGGCGGACC TCGAGCCCTC CACCAACACC CGGATCAAGG ATTCCTCCTC CGTGCTCCCC
GGTAGCTACG GGGGGCGCAA TCTTCACTTC GGCGTGCGCG AGCATGCCAT GGCCGCAATC
ATGAACGGCA TGGCCCGCCA CGGCGGGTTC ATCCCCTACG GCGCCACCTT CCTGGTCTTT
GCCGACTACT GCCGGCCGGC TATCCGGTTG GCGGCGCTCA TGAAGCAGCA GGCGGTGTAC
GTGTTCACCC ACGATTCCCT CTTCGTGGGT GAGGACGGTC CCACCCACCA GCCCGTGGAG
CAGCTCTCGT CACTGCGGCT CATCCCTAAC CTCCGGGTGA TCCGGCCAGC GGACGGCCCC
GAAACGGCCT TGGCCTGGGC TGCGGCTCTG CGGCGCACGG ACGGCCCCAC GGCCCTTGTC
CTGACCCGCC AGAAAGTGCC GGCCATCGCC CGGGAGGAGA CCCTTGACCC CAGAACCTTT
GCCAAGGGGG GCTACGTGGT CCGTTCCGGC GGGGCGGCCC CGGCCGTGGT TCTCATGGCG
AGCGGGTCCG AGGTAGGACT GGCTCTGGCC GCGGCAGAGA TTATGGCCGG TAACGGGGTT
GCGGCTCGCG TGGTATCTAT CCCCTGTATG GAGGCATTCC TGGCCCAGCC GGAAAGCTAC
CGGCGCCGCT GTCTGCCGGG ACGTGTCCCA CGAGTTGCGG TGGAGGCGGG GCACGGCGGC
CTCTGGTGGC GGCTCCTGGG TCCGGCTGGC CTGTTCATTG GCCTGGAGAC CTTCGGCGCT
TCGGCCCCGG AAAAGGTACT GGCCGAGCAG TACGGTTTCA CCCCTGAGCT GGTTGCCCGG
CGTGTGGCCG AGTTCGTGGA GCGCTGA
 
Protein sequence
MAAVSLTNED ARLGADTLRM LAVDAVEAAA SGHPGLPMGA ADYAFLLWHS HLRFDPADPE 
WPGRDRFILS AGHGSMLLYG LLHLFGFDLP LDELKRFRQW GSRTPGHPEY GHTPGVEVTT
GPLGQGFAMG VGMALAARMG SARFADERFD PCAHHIYALV SDGDLMEGVS QEAASLAGHL
KLGNLVYLYD DNRITIEGST DLAFSEDTAG RFAALGWHVQ AVDGHDVRQV DEALWRARVE
RERPSLIIAR THIAQGSPGK HDSAAAHGSP LGAEEAAATR RSLGWPDELF HVPERIRELC
EQRREALAEA RAAWQDELRR WRRRNSDKGR LWDLMAEKGV PRDLESRLLA AVGAEAGATR
SLAGKVLQAA AAVVPSLVGG SADLEPSTNT RIKDSSSVLP GSYGGRNLHF GVREHAMAAI
MNGMARHGGF IPYGATFLVF ADYCRPAIRL AALMKQQAVY VFTHDSLFVG EDGPTHQPVE
QLSSLRLIPN LRVIRPADGP ETALAWAAAL RRTDGPTALV LTRQKVPAIA REETLDPRTF
AKGGYVVRSG GAAPAVVLMA SGSEVGLALA AAEIMAGNGV AARVVSIPCM EAFLAQPESY
RRRCLPGRVP RVAVEAGHGG LWWRLLGPAG LFIGLETFGA SAPEKVLAEQ YGFTPELVAR
RVAEFVER