Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU3423 |
Symbol | tkt |
ID | 2688159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 3767539 |
End bp | 3769545 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637128118 |
Product | transketolase |
Protein accession | NP_954463 |
Protein GI | 39998512 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCGG TAAGCCTTAC CAACGAAGAT GCCCGCCTGG GCGCCGATAC CCTCAGGATG CTGGCGGTGG ACGCGGTTGA AGCCGCCGCC TCCGGTCACC CGGGGCTGCC CATGGGGGCC GCCGACTACG CCTTTCTCCT CTGGCACTCC CACCTCCGCT TCGACCCCGC CGACCCGGAG TGGCCGGGGA GGGACCGGTT CATCCTCTCG GCGGGGCATG GTTCCATGCT TCTCTACGGT CTGCTCCACC TCTTCGGCTT CGATCTTCCC CTGGATGAAC TGAAGCGGTT CCGCCAGTGG GGGAGCCGCA CCCCGGGCCA TCCGGAATAC GGCCATACCC CCGGCGTGGA GGTGACCACC GGTCCCCTGG GGCAGGGGTT CGCCATGGGG GTCGGCATGG CCCTGGCGGC GCGCATGGGC TCGGCCCGCT TTGCCGACGA GCGGTTTGAT CCCTGCGCCC ACCACATCTA CGCCTTGGTG AGCGACGGCG ACCTCATGGA GGGAGTCAGC CAGGAGGCGG CATCCCTGGC CGGTCACCTG AAGCTCGGCA ACCTGGTCTA CCTGTACGAC GACAACCGGA TCACCATCGA GGGTTCCACG GACCTCGCCT TTTCCGAAGA CACGGCGGGG CGCTTCGCGG CTCTTGGCTG GCACGTGCAG GCCGTTGACG GCCACGATGT CCGCCAGGTG GACGAGGCCC TCTGGCGGGC CCGGGTGGAA CGGGAGCGGC CCTCCCTCAT CATCGCCCGG ACCCATATCG CCCAGGGCTC GCCCGGCAAG CACGACTCCG CCGCCGCCCA CGGCTCGCCC CTGGGTGCCG AGGAGGCCGC AGCCACGCGC AGGAGCCTGG GGTGGCCCGA TGAGTTGTTT CACGTGCCGG AGCGGATTCG GGAGCTCTGC GAACAGAGGC GGGAAGCGCT CGCCGAGGCG CGCGCCGCCT GGCAGGATGA GCTCCGCCGC TGGCGCCGCC GCAATTCCGA CAAGGGACGG CTCTGGGATC TGATGGCGGA AAAGGGGGTG CCCAGGGATC TGGAGTCCCG GCTGCTGGCG GCGGTGGGAG CCGAAGCCGG CGCCACGCGC TCCCTTGCGG GCAAGGTCCT CCAGGCGGCC GCCGCCGTAG TGCCCTCCCT GGTCGGGGGC TCGGCGGACC TCGAGCCCTC CACCAACACC CGGATCAAGG ATTCCTCCTC CGTGCTCCCC GGTAGCTACG GGGGGCGCAA TCTTCACTTC GGCGTGCGCG AGCATGCCAT GGCCGCAATC ATGAACGGCA TGGCCCGCCA CGGCGGGTTC ATCCCCTACG GCGCCACCTT CCTGGTCTTT GCCGACTACT GCCGGCCGGC TATCCGGTTG GCGGCGCTCA TGAAGCAGCA GGCGGTGTAC GTGTTCACCC ACGATTCCCT CTTCGTGGGT GAGGACGGTC CCACCCACCA GCCCGTGGAG CAGCTCTCGT CACTGCGGCT CATCCCTAAC CTCCGGGTGA TCCGGCCAGC GGACGGCCCC GAAACGGCCT TGGCCTGGGC TGCGGCTCTG CGGCGCACGG ACGGCCCCAC GGCCCTTGTC CTGACCCGCC AGAAAGTGCC GGCCATCGCC CGGGAGGAGA CCCTTGACCC CAGAACCTTT GCCAAGGGGG GCTACGTGGT CCGTTCCGGC GGGGCGGCCC CGGCCGTGGT TCTCATGGCG AGCGGGTCCG AGGTAGGACT GGCTCTGGCC GCGGCAGAGA TTATGGCCGG TAACGGGGTT GCGGCTCGCG TGGTATCTAT CCCCTGTATG GAGGCATTCC TGGCCCAGCC GGAAAGCTAC CGGCGCCGCT GTCTGCCGGG ACGTGTCCCA CGAGTTGCGG TGGAGGCGGG GCACGGCGGC CTCTGGTGGC GGCTCCTGGG TCCGGCTGGC CTGTTCATTG GCCTGGAGAC CTTCGGCGCT TCGGCCCCGG AAAAGGTACT GGCCGAGCAG TACGGTTTCA CCCCTGAGCT GGTTGCCCGG CGTGTGGCCG AGTTCGTGGA GCGCTGA
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Protein sequence | MAAVSLTNED ARLGADTLRM LAVDAVEAAA SGHPGLPMGA ADYAFLLWHS HLRFDPADPE WPGRDRFILS AGHGSMLLYG LLHLFGFDLP LDELKRFRQW GSRTPGHPEY GHTPGVEVTT GPLGQGFAMG VGMALAARMG SARFADERFD PCAHHIYALV SDGDLMEGVS QEAASLAGHL KLGNLVYLYD DNRITIEGST DLAFSEDTAG RFAALGWHVQ AVDGHDVRQV DEALWRARVE RERPSLIIAR THIAQGSPGK HDSAAAHGSP LGAEEAAATR RSLGWPDELF HVPERIRELC EQRREALAEA RAAWQDELRR WRRRNSDKGR LWDLMAEKGV PRDLESRLLA AVGAEAGATR SLAGKVLQAA AAVVPSLVGG SADLEPSTNT RIKDSSSVLP GSYGGRNLHF GVREHAMAAI MNGMARHGGF IPYGATFLVF ADYCRPAIRL AALMKQQAVY VFTHDSLFVG EDGPTHQPVE QLSSLRLIPN LRVIRPADGP ETALAWAAAL RRTDGPTALV LTRQKVPAIA REETLDPRTF AKGGYVVRSG GAAPAVVLMA SGSEVGLALA AAEIMAGNGV AARVVSIPCM EAFLAQPESY RRRCLPGRVP RVAVEAGHGG LWWRLLGPAG LFIGLETFGA SAPEKVLAEQ YGFTPELVAR RVAEFVER
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