Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU3404 |
Symbol | |
ID | 2688167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 3746456 |
End bp | 3747178 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637128099 |
Product | amino acid ABC transporter, ATP-binding protein |
Protein accession | NP_954444 |
Protein GI | 39998493 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0452934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGAAG TACGCGACGT CAGCAAGAAC TTCGGCGGGC TCAGGGCCCT CGACCGGGTA ACGTTTGACG TGAAGGAAGG AGAGAAGGTG GTCATCATCG GCCCTTCCGG GTCGGGCAAG AGCACTCTTC TCCGTTCGCT GAACAAGCTG GAGCAGATCG ACACGGGACG GATCGTGGTG GACGGCATTG ATCTCTATGG CCAGGGGACC GACATCAACA AGTTGCGGGA AGAAGTGGGC ATGGTGTTCC AGTCCTTCAA CCTGTTTCCC CACAAGACCG TCCTGCAAAA TATCACTCTG GCCCAGTGCG TCGTGCGCCA ACGGAGCGCG TCCGAGGCGA CAGAAAAAGC CATGGGGCTT CTGCGCAAAG TGGGACTGGA GGAGAAGGCG GGCGCCTATC CGGCCAAGCT TTCCGGCGGT CAGCAGCAGC GGGTCGCCAT CGCCCGAGCC CTGGCCATGG ACCCGAAGCT CATGCTCTTC GACGAGCCCA CGTCAGCCCT TGATCCCGAG ATGATCGGGG AGGTGCTCGA CGTCATGAAG AGTCTCGCCC GTGAGGGAAT GACCATGGTG GTCGTTACCC ACGAAATGGG TTTTGCCCGT GAGGTTGCCG ACCGGGTCAT TTTCATGGAC GCGGGCAGGA TCGTGGAGGA GGGGACACCC GAGCACTTCT TCCGGAATCC GACCCACGAA CGGACCAAGC TGTTCCTGAG CCAGATACTC TGA
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Protein sequence | MVEVRDVSKN FGGLRALDRV TFDVKEGEKV VIIGPSGSGK STLLRSLNKL EQIDTGRIVV DGIDLYGQGT DINKLREEVG MVFQSFNLFP HKTVLQNITL AQCVVRQRSA SEATEKAMGL LRKVGLEEKA GAYPAKLSGG QQQRVAIARA LAMDPKLMLF DEPTSALDPE MIGEVLDVMK SLAREGMTMV VVTHEMGFAR EVADRVIFMD AGRIVEEGTP EHFFRNPTHE RTKLFLSQIL
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