Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU3377 |
Symbol | |
ID | 2686887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 3710946 |
End bp | 3711632 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637128071 |
Product | helix-hairpin-helix domain-containing protein |
Protein accession | NP_954417 |
Protein GI | 39998466 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2231] Uncharacterized protein related to Endonuclease III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGAT CCTCGGTGAC AACGGCGGGT GGGCCTGAGG GGGTGCGTGA CCGGCTCATG GCGGTCTACG ATCAACTCTT CGCGGCCTAC GGACCCCGCC ACTGGTGGCC CGCAGACACC CCCTTCGAGG TCTGCGTCGG TGCAATCCTG ACCCAGAATA CCAACTGGGG CAACGTGGAA AAGGCCATTG TCCGGCTCAA GGCTGCGGGG CTCCTCTCCC CGGAGGGGCT GCGCGATGTA CCTGTTGCCG AGTTGGCGGA GACGATCAGG CCGGCCGGTT ACTACAATGT CAAAAGCGCC CGGCTCAAGG ATTTTGTCGG GTTTCTCTTC GGCCGCTTCG GCGGTAGCCT GGAGCGGATG TTTGCGGGAG AGTGGCGGGA ACTGCGACGG GAACTGCTTG GGGTAAGGGG TATCGGCCGG GAGACAGCCG ACTCGATCCT GCTCTATGCG GGAGGCAAAC CTTCCTTCGT GGTTGATGCC TATACGAAAC GCCTGTTTTC CGCCCTGGGT CTCGTGGCCC CGACGACCGA CTATGAGACC GTCCGCGCAC TCTTCATGGA CAACCTTCCC GAAGACACTA CGCTGTTCAA CGAATATCAC GCCCTCATCG TGGAGCATTG CAAGCGGCAC TGCACCACCC GCCCCCGTTG CGGCGAGTGC GGACTCCATC TGTTATGTCG AGCCTGA
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Protein sequence | MSGSSVTTAG GPEGVRDRLM AVYDQLFAAY GPRHWWPADT PFEVCVGAIL TQNTNWGNVE KAIVRLKAAG LLSPEGLRDV PVAELAETIR PAGYYNVKSA RLKDFVGFLF GRFGGSLERM FAGEWRELRR ELLGVRGIGR ETADSILLYA GGKPSFVVDA YTKRLFSALG LVAPTTDYET VRALFMDNLP EDTTLFNEYH ALIVEHCKRH CTTRPRCGEC GLHLLCRA
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