Gene GSU3374 details

Gene Information

• Locus tag: GSU3374
• Symbol: rpe
• ID: 2686883
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 3708688
• End bp: 3709353
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637128068
• Product: ribulose-phosphate 3-epimerase
• Protein accession: NP_954414
• Protein GI: 39998463
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0036] Pentose-5-phosphate-3-epimerase
• TIGRFAM ID: [TIGR01163] ribulose-phosphate 3-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TTGCCCCATC AATCCTTTCC GCCGACTTTT CCCGCCTGGG CGATGAAGTC 
CGTGCCGTGG CGGCGGCCGG GGCTGATTAT ATCCACGTGG ACGTCATGGA CGGGCACTTC 
GTGCCCAACA TAACCATCGG CCCCCTGGTG GTGGAGGCGG TGCGCAGGGT TACCGAGCTT 
CCCCTGGACG TCCACCTGAT GATCGAGCAT CCCGACCGCT ACATCCCCGA CTTCGCCGCC 
GCAGGTTCGG ATATCATCGT GGTCCACGCG GAGGCTTCCA CTCACCTCCA CCGTACGATC 
CAGCTCATCA AGTCCCTGGG CAAGAAGGCG GGGGTTTCCC TCAATCCGGC CACTCCCCTC 
AACTGCCTCG ACTATGTCCT CGAGGATCTC GACCTGGTGC TGCTCATGAC CGTCAACCCG 
GGATTCGGAG GCCAATCGTT CATCGAGGCC TGCATTCCCA AGATCCAGTC ACTGCGGGCA 
ATGCTCGACC GCCGCGGCTG CGAGGCGGAG CTTGAGGTGG ACGGCGGGGT GAAGATCGAC 
AACATCGCCC GCATCGCCCA TGCCGGCGCC GACGTCTTCG TGGCCGGAAG CGCCATTTTC 
GGCAGCCCCG ACTATGAAGC AACCATAAAA GAGCTAAAGC GTCGGGCAAA AGAGCCGATA 
CTGTAA 

 

Protein sequence

MKKIAPSILS ADFSRLGDEV RAVAAAGADY IHVDVMDGHF VPNITIGPLV VEAVRRVTEL 
PLDVHLMIEH PDRYIPDFAA AGSDIIVVHA EASTHLHRTI QLIKSLGKKA GVSLNPATPL 
NCLDYVLEDL DLVLLMTVNP GFGGQSFIEA CIPKIQSLRA MLDRRGCEAE LEVDGGVKID 
NIARIAHAGA DVFVAGSAIF GSPDYEATIK ELKRRAKEPI L