| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3371 |
|---|
| Symbol | |
|---|
| ID | 2688202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 3704800 |
|---|
| End bp | 3705570 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637128065 |
|---|
| Product | AP endonuclease |
|---|
| Protein accession | NP_954411 |
|---|
| Protein GI | 39998460 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATC GCATCCACGC CCATGTCCCC TACCCGATGC TGGCCGACAA CCTGACGGCC
GTCGCCGCCC GTGGGATCAA TCCCGAAGTC CACTTTTCGG GTGAGGCCCT GGACTCCCTT
GTCCCGGAAA AACTGATAGC CGTTGCCGAC ACCCTGAACG CCACCGGGCT GCGCTCCACC
ATTCATGCTC CCTTCGTGGA CCTGAACCCA GGCTCGGCCG AACGCCTCAT CCGCGAGGCT
ACCCGTCATC GGCTCAACCA GGTGATTGAC GCCGCGGCAA TCCTCAGGCC CGACGTGATC
GTCTTCCATC CCGGCTATGA CCGCTGGCGC TACGGCGAGA ACCAGGATAT CTGGCTCGCC
CACAGTATTG AGACGTGGCG GAGAGTGCTG GAGCGGACCG AACCCATTGG CTGTACAGTC
GCAGTGGAAA ACATCTTCGA GGAGGAGCCT TCAACCCTGC GAGCCCTGCT GGAAGAGATC
GACCATCCCC GCTTCTGCCA CTGCTTCGAC GTGGGGCACT GGAATCTGTT TCACACGGTG
GGGATGGAGG AATGGTTCGA TGCCATGGGA CGCTTCGTGG CGGAGGCCCA CATCCACGAC
AATTTCGGCA CCCGCGATGA CCATCTGCCG CTGGGCGAAG GGGCCATCGA TTTTGATCTC
TTCTTTTCCC TCATGGCCCG GCACGCCCCC CAGGCCGTCT GGACCATCGA GGCCCACTGC
CCGGCAGCTC TGGACAGGGC ACTCGTTGCC ATCGAGCGCT ACCGGAAATG A
|
|---|
| Protein sequence | MSDRIHAHVP YPMLADNLTA VAARGINPEV HFSGEALDSL VPEKLIAVAD TLNATGLRST
IHAPFVDLNP GSAERLIREA TRHRLNQVID AAAILRPDVI VFHPGYDRWR YGENQDIWLA
HSIETWRRVL ERTEPIGCTV AVENIFEEEP STLRALLEEI DHPRFCHCFD VGHWNLFHTV
GMEEWFDAMG RFVAEAHIHD NFGTRDDHLP LGEGAIDFDL FFSLMARHAP QAVWTIEAHC
PAALDRALVA IERYRK
|
|---|
| |