| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3361 |
|---|
| Symbol | |
|---|
| ID | 2688237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 3692660 |
|---|
| End bp | 3694207 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637128055 |
|---|
| Product | transglutaminase domain-containing protein |
|---|
| Protein accession | NP_954401 |
|---|
| Protein GI | 39998450 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGTGCCG TTCGACGAGA GTCTGACGGC GCGCCGTTCT CACCGCCGTT TCGAGCCCAC
TACGCCATGC ATATGCCCCG TACCCTGGTC AGGATCATAG TCGTTTTCCT CGTCACGTTT
TTTCTTCAGT CCATCGCTCG GGCCGGGGAT TCCCGGCTTT CCGTACCTCC TCTCGCGAAA
CCGCCCCTGG GTGAGCGGTG GTTCGGTATC TTCCTGGGGG GGGAACGGAC CGGTTTCGGC
CGGCAGGTGA CAACCTCGGT GGACGACGGC TACGAGATGA TAGTGGAAGG GAGCGTCAGG
ATGGTTGTCC TCGGCTTCTC GCGCGAGGCG GCTTCCCGCG AGGTCTATCG GGTGGGACGT
GACCTCGCCC TCCGCTCCTT CCGGGTGGAG CAGGTGCTTG ACGGTACTCC CCAGCGACTG
GAGGGTGAAG CGACGCCGGC GGGAGTGAAG GTACGGCTCG AACGGGGAGG CAGCCGGAAG
GAGAAGCTCC TCAAGACCAA GGGGGCAGTA TACCCGCCGC CGGCCCTGAA CCTCTATCCG
CTCATGAAGG GGGCCGTTGC GGGGAAGCGC TACAAGGTAA CCATGCTCGA TGTGGAGGGC
GTTTCCCTGA AAAGCGTCGC CATCACCGTG CAGGGGGCGG ATACTGCGGC AGGCGGGATA
CAGGCCATCC ACATGGTGAA CGACCTCTAC CCCATGGTCG ACAATGAAGT CTGGGTGGAC
CGGGATGGGA ACACCCTCCG CGAGTCGGTG CGTGACGGCC TGGTGGAGAC CGTGGCCGAG
GCCGGCGACG CAGGGCGGCG ATTCCTGGCC GAAGCCACCC TGGCCCGGCG TGACATGATC
CTCGACTTCA GTCTTGTCCG GTTGAATCCT CCCCTTGAGC GGGTCCGGGA ACTCAAGAGC
CTCGTGATCA CTCTTGAGGG AATCCCCCGG GAGATGTCGC TACCCGATGG GGGAGGGCAG
AGCGTGCGGC GTCTGGGCGA CGGAAGCGTG CAGGTCACGG TGGAGCCGGT GGTGCCGTCC
GCTACGGCGG GTGGAGATAG CGCACCTGCG GTTGCTGGAG CTGCCCTGGC CCCCTGGTTG
GCCCCTACCG ACCTCCTGCC GGCGGATCAT CCCGAGATCG TGGCTACGGC CCGGCGGGTT
ATCGGGGATG ATGTCTCCGC CCGGGGCCGG CTGGTAAAAC TGGTGAGCTG GGTGAGCAGC
TACGTGAAAG ACAGTGTCAC TGATGCCCCA TCTCCCCTCG ACACGCTTGC CTCGCGAACG
GGAAACTGCC AGTCGCATGC ACGCCTTTTC GTCTCCCTGG CCCGTGCTGT GGGCATTCCC
GCCCGTTTCG TATCAGGGCT TGTCTCCCTG GACGGAAAGG GCCTGCTCTA TCACAGTTGG
GCTGAGGTTT TTGTGGATGG CGCCTGGCAG CAGGTTGACC CCACTTTTGA TCAGGTTCCT
GCCGATGCCT CGCATGTGAA ACTGGTTGAG GGGGAAAGCC CCGACCGGCT GGCGGCCATT
GCCGCCGTGG TCGGCAGGAT CAAGGCCCGG GTGGTTGAGA TGAGGTAG
|
|---|
| Protein sequence | MRAVRRESDG APFSPPFRAH YAMHMPRTLV RIIVVFLVTF FLQSIARAGD SRLSVPPLAK
PPLGERWFGI FLGGERTGFG RQVTTSVDDG YEMIVEGSVR MVVLGFSREA ASREVYRVGR
DLALRSFRVE QVLDGTPQRL EGEATPAGVK VRLERGGSRK EKLLKTKGAV YPPPALNLYP
LMKGAVAGKR YKVTMLDVEG VSLKSVAITV QGADTAAGGI QAIHMVNDLY PMVDNEVWVD
RDGNTLRESV RDGLVETVAE AGDAGRRFLA EATLARRDMI LDFSLVRLNP PLERVRELKS
LVITLEGIPR EMSLPDGGGQ SVRRLGDGSV QVTVEPVVPS ATAGGDSAPA VAGAALAPWL
APTDLLPADH PEIVATARRV IGDDVSARGR LVKLVSWVSS YVKDSVTDAP SPLDTLASRT
GNCQSHARLF VSLARAVGIP ARFVSGLVSL DGKGLLYHSW AEVFVDGAWQ QVDPTFDQVP
ADASHVKLVE GESPDRLAAI AAVVGRIKAR VVEMR
|
|---|
| |