Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU3353 |
Symbol | |
ID | 2686435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 3684041 |
End bp | 3684931 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637128047 |
Product | RNA pseudouridine synthase family protein |
Protein accession | NP_954393 |
Protein GI | 39998442 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0622873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCTGA CGGCGCGGGT GGGGGCCGAC CAGGCCGGCG TACGGCTCGA CGAGGGGGCG GCGCGGCTCT TTCCCCAGCT CTCCAAAACC CGGATCCGTA CTATCATCGA CTGGGGAGGA TGCGCTGTGG GGGGGACCAT GGTGCGGGTG GCGTCCCGCC GTCTTCAGGC TGGTGACGAA ATCGTCCTCG GGGTAATGGA GCCGGAGCGT TACCGGGAGA TTACCCTGGC ACCCGAAGAT ATCTTGTTTG AAGACGGCGG CTATCTGGCC GTGAACAAGG CCTCCGGACT CAACTGCCAG CGGACTCCCT ACCAGCTCAA GGGGACCGTT GAGTATGCCG TGACCCTCCA CTTCCGGGCC TGTGGCAGCG CCGAGCCCGC ACGAGTGATC CACCGCCTGG ACCGGGGCAC CTCGGGGGTT ATGATCTTTC CCGCCTCCCG CCGGGCGGCA GCCCATATCT CGCGGGAACT GAAGGAAGGG AGGGTGGAAA AGGTCTACTG GGCGCTGGTA GCGGGCATGC CGCTGGCCGA TTCCTGGCAG GTCGACGCAC CCGTGGCCAA GGTGGGTACG TCCCGCTACG GGGTGGCGCC GGTCGGCAAG GCCGCCTTGA CCGAGTTCCG GGTTGTGGCC CGGGGGAACG GCGCGACTCT GGTGGAAGCC CGTCCCCGCA CCGGCCGCAC CCACCAGATC CGCGTCCATC TGGCCCATGG GGGGCTTTCG ATCATCGGCG ATACGACTTA CGGCGGTATC GCCGCGCCGC GGATGATGCT CCACTGTCGA ACCATGACCT TTCGGGCTGA AGACGGCCGG CCGGTGAGCG CCACGGCCCC CCCTGACCGG GAGTTTACCG CCGCTTGCGA ACAGCACGGA ATCCAGTTCG GCGGCGCATG A
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Protein sequence | MILTARVGAD QAGVRLDEGA ARLFPQLSKT RIRTIIDWGG CAVGGTMVRV ASRRLQAGDE IVLGVMEPER YREITLAPED ILFEDGGYLA VNKASGLNCQ RTPYQLKGTV EYAVTLHFRA CGSAEPARVI HRLDRGTSGV MIFPASRRAA AHISRELKEG RVEKVYWALV AGMPLADSWQ VDAPVAKVGT SRYGVAPVGK AALTEFRVVA RGNGATLVEA RPRTGRTHQI RVHLAHGGLS IIGDTTYGGI AAPRMMLHCR TMTFRAEDGR PVSATAPPDR EFTAACEQHG IQFGGA
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