| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3303 |
|---|
| Symbol | |
|---|
| ID | 2688251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 3626626 |
|---|
| End bp | 3627030 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637127995 |
|---|
| Product | methylmalonyl-CoA epimerase |
|---|
| Protein accession | NP_954343 |
|---|
| Protein GI | 39998392 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
|---|
| TIGRFAM ID | [TIGR03081] methylmalonyl-CoA epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000981467 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGCA AAATCAACCA TATCGGCATT GCCGTAACAT CCCTCGACGC GGCCGTTCCT
TTTTACCGCG ACAATCTCGG CATGGCCTTC ACGGGGACTG AAGAAGTGGC AGAACAGAAG
GTGCGGGTTG CCTTCTTCCA GATCGGCGAA ACCAAGATCG AGCTCCTGGA GCCCACGGCT
GAAGACAGCC CCATCGCCAA ATTTCTGGAA AAAAACGGCA ACGGAATTCA TCATATCGCC
TATGAGGTTG ATGATATTGA AGCGGCAATC GCGAAACTGG TCGCGGACGG GGCCCGGATG
ATCGACAGTT CGCCCCGCAA CGGCGCCCAC GGAGCACGCA TCGCCTTTGT TCATCCGAAG
AGCAGCGGCG GCGTTCTCAC GGAACTATGC CAGTCAGGAC ACTGA
|
|---|
| Protein sequence | MLSKINHIGI AVTSLDAAVP FYRDNLGMAF TGTEEVAEQK VRVAFFQIGE TKIELLEPTA
EDSPIAKFLE KNGNGIHHIA YEVDDIEAAI AKLVADGARM IDSSPRNGAH GARIAFVHPK
SSGGVLTELC QSGH
|
|---|
| |