| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3286 |
|---|
| Symbol | |
|---|
| ID | 2685538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 3605124 |
|---|
| End bp | 3606671 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637127978 |
|---|
| Product | uroporphyrinogen III synthase/methyltransferase |
|---|
| Protein accession | NP_954326 |
|---|
| Protein GI | 39998375 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1587] Uroporphyrinogen-III synthase |
|---|
| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGT CCACAGCTTC CCGCACCAAT TGCCTTGTCT ACCTCATCGG CGCCGGCCCC
GGCGACCCGG GCCTCATTAC GGTTCGGGGC CGGGAATGCA TCGCACGGGC CGATGTGGTC
ATTTACGATT ACCTGGCCAA CGACGAACTC CTCTCCTTCG CCCGTCCCGA TGCGGAACTC
ATTTATGCCG GCAAGGTTGG GGGGCAGCAT AACCGGGCCC AGTGGCAGAT CAATGAGCTC
CTGGTCCGCA AGGCGCTTGA GGGACGCATC GTGGCGCGCC TCAAGGGTGG TGATCCCTTC
GTCTTCGGCC GGGGCGGCGA GGAGTGCGAG GCCCTGGTCA CCGCCGGCGT ACCCTTCGAG
GTGGTGCCGG GAGTGACTGC GGGAATCGGG GCAGCGGCCT ACGCCGGCAT CCCCCTTACC
CACCGCAACG TCACCACATC GGTTGCCTTT GTCACGGGTC ACGAGAGCCC GGGCAAGAAA
TCATCGGACA TCGATTGGGA GGGGCTCTCC CTCGGCAGCG GCACTGTTGT GTTTTACATG
GGAGTCAAGA GTCTCCCGCA CATTACGGAA AACCTCATGG CCCACGGCCG GCGCGCCGAC
ACCCCGGTGG CCCTCGTCCG CTGGGGAACC CGACCGGAGC AGGAAGTTCT GGTGGGAACG
CTGGCCGACA TCGCCGACAA GGTCCGCCGC ACAGGGTTCA AGGCACCGGC CATAACCGTT
GTGGGCGAGG TGGTCCGGCT GAGGAAAACG CTTCGCTGGT TCGACAACCG GCCCCTTTTC
GGTCGCAGTA TCATGGTCAC CCGCGCCGCC GACCAAGCGG GCGAATTCAG CGTCATGCTC
CGTTCCCTGG GCGCACGGGT GCTTGAGTGT CCCACCATCG CCATCGCGCC ACCCGAGAGC
TGGGATGACC TCGACAGCGC CATCAGCCGC ATCGATACCT TTGACTGGGC CATCTTCACC
TCATTCAACG CGGTTCGCTT CTTCTTTCAG CGGCTGGACG CCGCGGGCCG TGACTCGCGC
GCCCTGGGAG CCTGCCGGAT CTGCGTCGTG GGCCCGAAAA CGGCCGAAGC CCTTGCGCCC
TACGGAATCC GGCCCGACCT GGTGGCCGCA GACTATAAAG GGGAAGGGGT TATCGAGGCG
CTTCGCGACG TACCGTTGGC CGGCAAGCGG GTCCTGTTTC CCAAAGGGGA CCGGGCGCGG
GACGTGATCC CCACGGGCCT TGCAGCCTTC GGCGCCCATG TCGAGGCGCC GGTCGCCTAC
CGCAACGCTG CGCCCGACGC CCTCCCGGCC GGCACTATCG AGGAACTGGA GGACCGGCGC
ATCCACTGCG TAACGTTTAC CTCTTCTTCC ACCGTGCAGA ACCTGGCGGC CATTCTTGGG
GAGAACAGAA TGCTCCACCT GTTGGAAGGG GTTATTATAG CCTCCATCGG CCCCATCACC
TCCCGCAGTT GCCGCGAGCT GGGGCTGCAG GTCCACATCG AGCCGCAGGA GTACACCCTG
GCGGCTCTCA CCGCTGAGAT GGTCCGCCAC TTCTCGGCAC CCGCCTGA
|
|---|
| Protein sequence | MTMSTASRTN CLVYLIGAGP GDPGLITVRG RECIARADVV IYDYLANDEL LSFARPDAEL
IYAGKVGGQH NRAQWQINEL LVRKALEGRI VARLKGGDPF VFGRGGEECE ALVTAGVPFE
VVPGVTAGIG AAAYAGIPLT HRNVTTSVAF VTGHESPGKK SSDIDWEGLS LGSGTVVFYM
GVKSLPHITE NLMAHGRRAD TPVALVRWGT RPEQEVLVGT LADIADKVRR TGFKAPAITV
VGEVVRLRKT LRWFDNRPLF GRSIMVTRAA DQAGEFSVML RSLGARVLEC PTIAIAPPES
WDDLDSAISR IDTFDWAIFT SFNAVRFFFQ RLDAAGRDSR ALGACRICVV GPKTAEALAP
YGIRPDLVAA DYKGEGVIEA LRDVPLAGKR VLFPKGDRAR DVIPTGLAAF GAHVEAPVAY
RNAAPDALPA GTIEELEDRR IHCVTFTSSS TVQNLAAILG ENRMLHLLEG VIIASIGPIT
SRSCRELGLQ VHIEPQEYTL AALTAEMVRH FSAPA
|
|---|
| |