Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU3285 |
Symbol | hemC |
ID | 2685563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 3604051 |
End bp | 3605007 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637127977 |
Product | porphobilinogen deaminase |
Protein accession | NP_954325 |
Protein GI | 39998374 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTTA ACCGCCTCAG AATCGGAACC CGGGCGAGCC AGCTCGCTCT CTGGCAGGCC AATTGGGTCA AGTCCGAGCT GGAAAAACGC TACCCCGGCA TGGAGGTCGA GCTGGTCAAG ATCAAGACCA TCGGCGACAA GATCCTTGAC GTCCCCCTGG CCCAGGTGGG TGGCAAAGGA CTCTTCGTGA AAGAGATCGA GGAGGCGATG CTGAGGGGCG AAATCGACAT CGCCGTGCAC AGCATGAAGG ACGTGCCGAC CGAGTTTCCC GAAGGCCTCG GACTGGTCTG CATCACCGAG CGTGAAGACC CTCGTGATGC TTTCATTTCC AACGGCGTGA CCTTCGCCAA TCTGCCCCAG GGGGCGAAAA TCGGTACATC GGCGCTGCGC CGCCAGGCCC AGCTCCTCAA GGTCCGTCCC GACCTCGAAA TGGTAATAAT CCGCGGCAAC GTGGAGACGC GTATCCGGAA GCTCACCGAG GACAAGCTGG ACGCCGTCAT CCTGGCTGCC GCAGGCCTCA AGCGCCTCGG ATTCACCGAC GTGGTAACCG AATATCTGCC CGTTGATCTC TCCCTGCCGG CTATCGGCCA GGGCGCCCTG GGCCTGGAGT GCCGCCTCGA CGACCAGGCC GTCCGCGAAA CCATCGACTT TTTCAACCAC CCTGACACTG CACACGCGGT ACGGGCCGAG CGGGCACTGC TCTGGCGCTG CGAGGGGGGA TGCCAGGTTC CCATTGCCGC CCACGGCCAG GTGAGCGGAG ACTCCCTGAC GCTGACCGGC TTTATCGCCT CCGTGGATGG CACCCGTTCC GTCAAGGAGA GCATCTCAGG GCCGGTGACC GACTGCGAGA AGCTGGGCAT TGCCCTGGCC GAGAAACTCC TCGCCGACGG CGGGCACGAG ATTCTTGCCG AGGTCTACCA GCGGGAAGTG TCCCGGGAGA AGGAAATCCC GGTTTAA
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Protein sequence | MALNRLRIGT RASQLALWQA NWVKSELEKR YPGMEVELVK IKTIGDKILD VPLAQVGGKG LFVKEIEEAM LRGEIDIAVH SMKDVPTEFP EGLGLVCITE REDPRDAFIS NGVTFANLPQ GAKIGTSALR RQAQLLKVRP DLEMVIIRGN VETRIRKLTE DKLDAVILAA AGLKRLGFTD VVTEYLPVDL SLPAIGQGAL GLECRLDDQA VRETIDFFNH PDTAHAVRAE RALLWRCEGG CQVPIAAHGQ VSGDSLTLTG FIASVDGTRS VKESISGPVT DCEKLGIALA EKLLADGGHE ILAEVYQREV SREKEIPV
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