| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3266 |
|---|
| Symbol | |
|---|
| ID | 2686368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 3581843 |
|---|
| End bp | 3585079 |
|---|
| Gene Length | 3237 bp |
|---|
| Protein Length | 1078 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637127959 |
|---|
| Product | DNA helicase II, putative |
|---|
| Protein accession | NP_954307 |
|---|
| Protein GI | 39998356 |
|---|
| COG category | [L] Replication, recombination and repair
[S] Function unknown |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases
[COG1379] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00375] conserved hypothetical protein TIGR00375 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTATT GCGCCGATCT CCATATCCAT TCGCCCTTTT CCCGGGCAAC GAGCAAGGAG
TGCGACCCTG CCGGGCTTGC CGGGTGGGCG AGGGTGAAGG GGATTCAGGT GGTGGGCACG
GGCGACTTTA CCCATCCGGG GTGGTTTGCC CGGCTGCGGG AGGTGTTGGA GCCGGCCGAA
CCGGGCTTCT TCAGGCTGCG GGACGAGAAT GCCCCCGCCC CCTTGGCCGG ACTCGCTCCT
TCAACCGCAC CGGTCCGTTT CATGCTCACC GCGGAGATCA GCTGCATCTA CAAGCGGCAC
GGGGCGGTGC GCAAGGTCCA CAACCTCCTC TACGTCCCCG ACTTTGCCGC TGCCGAACGG
GTCAACGCCC GGTTGGCCGG CATCGGCAAT ATCGAGTCCG ACGGCCGCCC CATCCTAGGC
CTCGACTCCC GGAATCTGCT GGAAATCCTG CTGGAGGCCA CGCCGGACGG ATTCCTGGTG
CCGGCCCACA TCTGGACCCC CTGGTTTTCC CTGTTCGGCT CCAAGTCCGG CTTCGATACG
GTGGAAGAGT GCTTCGGCGA CCTTGCCCCT CACGTCTTTG CCCTGGAAAC CGGCCTTTCG
TCCGATCCGG ACATGAACCG GCTGATTTCC GCCCTCGACC GGTTTGCCCT CATCTCCAAT
TCTGACTGCC ATTCCCCGTC CCGACTGGGG CGCGAGGCCA ATCTCTTCAG CACCGGCTTC
GATTTCTTTT CACTGCGCGA CGCCCTGAAG GGCAACCACC GCGAAACCTT CCGCGGTACC
GTGGAATTCT TTCCCGAGGA AGGGAAGTAC CACATGGACG GCCACCGGGA CTGCGGCATC
CGCTTCGAGC CCGACGAGAC GCGCCGGCAT GGGGGACGCT GCCCCGTGTG CGGCCGTCCC
CTCACTGTGG GGGTGCTCCA CCGGGTGCTG GAACTGGCCG ACCGGGATAC GCCGCTCTTT
CCCGACGATG CCCCTACGTT TTTCAGCCTG GCGCCGCTGA CGGAAGTGGT GGGAGAAATC
CTCGGAGTGG GCCCGGCCTC CAAGCAGGTC ATGAGCCACT ACGTCCGGCT GATCGAGCGG
TTCGGTTCGG AGTTGGATAT CCTCCTCCGG GTCGATCCTG GCGAGATTGC CGTCGTGTCG
CCGGTTCTGG CCGAGGCGAT CGTCCGGATG AGGGAGGGCC GGGTGATCCG CCAGGGGGGC
TTTGACGGCG AGTACGGAAC CATCAAGGTC TTCGAGGAGG GTGAGGTGGC TCGGCTGTCA
GGACAGGGGG GGCTTTTCAG CGACGGCGCT CCATCCCGGC GGGGGCGTTC CAAAGCGATC
AGCCGGCCTC CGGCAGCCAG CGGGCGGAGA TCGGTGACCC CGCCCGATCC GGCGCCTGCC
GCGGGACCCG ATCCCGGCCA GGCCGAGGCG CTCGCCTGCG ATGCATCCCG GGTGCTGGTG
GCCGCTGGAC CGGGTACCGG CAAAACCTAC ACCCTGGTGG CGCGGCTTGC GGCACTGCTT
GCTGCGCCGG GCACGGACCC GGCCCGGGTC TGCGCCATCA CCTTCACGAA CCGGGCAGCC
GCCGAGGTGC GGGAGCGATT GGCCGCGGTG GCGGGCGAGG CTGCCGGACA GGTGTTTGTC
GGCACTTTTC ACCGCTTCTG CCTCGACTGG CTCAGGCGCG AGGAGCCCGA CCGGGTCGTG
GTGGGGGACG AAAGCCGGGA GCGGCTGTTG CGGCGCCTCT TTCCCGAAAT CGGTGTCCGG
GAGCGAAGCG GCTTGGCCGC GGAGATCGCC GATTTTCTGC ATCGCGACAA TGGCGGGGAC
GCACCGGAGC CGGTGCGTTT CTATCTTGAC GAACTGGCCC GGCGCGGCGC CATGGACTTG
GACGACGTGG TCCCGGCCCT GGTCCGCCGC CTGAGAGGCG ACGAGACCTT CCGGCGGCGG
GTGTGCGCCG GCGTCGCCCA TCTCTTCGTG GACGAATTCC AGGACCTGAA CGCTCCCCAG
TACGCCTTGG TGGAGATACT GGGGGAAGAG GCCACGATCT TCGCCATCGG CGACCCAGAC
CAGGCCATCT ATGGCTTCCG GGGTAGTGAT CCCTCTTTTT TCTTCCGTTT CGCCGACCTT
CCCGCCACCC GGCGGCTGGA CCTCAGCCGC AACTACCGGT CGGCGGCGCC CCTCGTCGAG
GCCGCATCGG CCGTCATCGC CCACAACCGG CTCAGGAGCG GCATCAGTCT AACGCCTACC
ACGGCGCGGG AGGGAGCGAT CGAGTTGTAC AGGGCTCCGA CGCCGGCGGC GGAGGCCGAG
TTTATCGTTC GGCGCATCGA GGAGCTCATG GGGGGGATCA GCAGTTTCTC CATCGCCTCG
GGGCGGGGCG GCGACCAGGA CAGCCGCCGG AGCTTCGGCG ACATCGCCAT ACTCTACCGG
TTGGCGCGGC AGGCCGACGA GTTGGCCAAC GCCCTGGACC GGCGGGGGAT TCCGTTCCAG
TTGGTGGGCG CCGTTCCCTA CTTCCTCGGC CCGGTCGCGG GCGCGGCCAC CCGGTTTGTC
CGAGCAGCGG CGGGGAGTAC GGAGCTGGCC GACTGGCTGG CTCTGGCACA GGATCTGCCG
GGGGTCGGCG AGGGTACCAT CCGCCGGCTG GAAGAGGCCC TTCCCCTGAC CGGCGATTTC
CCGGCGCTCG TGGCCGGTGT CGAGCTGCCG CCCCCTGTTG CGCATCGGAT GGCCGAGCTG
ACTGCTCTCC TTGAACGCTT CCGGTCCGTG GCCGGTCGTG AGGGAATTGC TCCGGCCCTG
GGTGAAGCCC TGACCCTGTT CGGCACGGAT CAGGGGCATG CCGACTGTAG GCGGCTCCTG
GCCCTTGCCG GAAGCTTCGG CCGGGACATC GTCGCCTTTG ACCGGCATCT GCGGGAGTAT
GCCGCCGAAA CGGTTTATGA CGAGCGGGCC GAGGCGGTGG CGCTCATGAC GCTCCATGCC
TCCAAGGGTC TGGAATTCCC CGTGGTCTTC CTGGCGGGGT GCGAGGAGGG GCTTATCCCG
TGCACTCTCT GGCGGGACGT GGATGTGGAG GAGGAACGGC GGCTTTTCTA TGTGGGTATG
ACCCGGGCGA AGGAGACGCT CGTGCTCAGC GCCTCCTCTG AACGCCCCTG GGTCAGTCCT
GCTGAGCGGC CGCTTTCCCG CTTCGCGGGA GAAATCCCTG GACGGTTGAT CCGGCAGCCG
GAGCCGGGCC GTGGCGGCCG GCGGAAGCCG AAGGGGGAGC AGCTGGACCT TTTTTGA
|
|---|
| Protein sequence | MDYCADLHIH SPFSRATSKE CDPAGLAGWA RVKGIQVVGT GDFTHPGWFA RLREVLEPAE
PGFFRLRDEN APAPLAGLAP STAPVRFMLT AEISCIYKRH GAVRKVHNLL YVPDFAAAER
VNARLAGIGN IESDGRPILG LDSRNLLEIL LEATPDGFLV PAHIWTPWFS LFGSKSGFDT
VEECFGDLAP HVFALETGLS SDPDMNRLIS ALDRFALISN SDCHSPSRLG REANLFSTGF
DFFSLRDALK GNHRETFRGT VEFFPEEGKY HMDGHRDCGI RFEPDETRRH GGRCPVCGRP
LTVGVLHRVL ELADRDTPLF PDDAPTFFSL APLTEVVGEI LGVGPASKQV MSHYVRLIER
FGSELDILLR VDPGEIAVVS PVLAEAIVRM REGRVIRQGG FDGEYGTIKV FEEGEVARLS
GQGGLFSDGA PSRRGRSKAI SRPPAASGRR SVTPPDPAPA AGPDPGQAEA LACDASRVLV
AAGPGTGKTY TLVARLAALL AAPGTDPARV CAITFTNRAA AEVRERLAAV AGEAAGQVFV
GTFHRFCLDW LRREEPDRVV VGDESRERLL RRLFPEIGVR ERSGLAAEIA DFLHRDNGGD
APEPVRFYLD ELARRGAMDL DDVVPALVRR LRGDETFRRR VCAGVAHLFV DEFQDLNAPQ
YALVEILGEE ATIFAIGDPD QAIYGFRGSD PSFFFRFADL PATRRLDLSR NYRSAAPLVE
AASAVIAHNR LRSGISLTPT TAREGAIELY RAPTPAAEAE FIVRRIEELM GGISSFSIAS
GRGGDQDSRR SFGDIAILYR LARQADELAN ALDRRGIPFQ LVGAVPYFLG PVAGAATRFV
RAAAGSTELA DWLALAQDLP GVGEGTIRRL EEALPLTGDF PALVAGVELP PPVAHRMAEL
TALLERFRSV AGREGIAPAL GEALTLFGTD QGHADCRRLL ALAGSFGRDI VAFDRHLREY
AAETVYDERA EAVALMTLHA SKGLEFPVVF LAGCEEGLIP CTLWRDVDVE EERRLFYVGM
TRAKETLVLS ASSERPWVSP AERPLSRFAG EIPGRLIRQP EPGRGGRRKP KGEQLDLF
|
|---|
| |