| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3252 |
|---|
| Symbol | |
|---|
| ID | 2688279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 3564114 |
|---|
| End bp | 3565757 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637127945 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | NP_954293 |
|---|
| Protein GI | 39998342 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.422778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTGGA AGTGCTGCTG GAACAGAAAC GTTATTGAGC CGGCCGATTG CCCAAACATC
GGCGAAGGCG AGGAAATCCT CTTTTCATCC CTCCAACGCA GAGTGATCGA AAAATGCGTG
GATTGCCCGC TGTTCGCCGA AGACCTGAAG GCACTGCGCG ACTCGGGGCA CCCCCTCGCG
GCAGTGCTCC CCATTGTGGT GGCTGAGCTC CAGGAACAGC GGAGCCGACT CCAGTCCATG
GTCGGCTTCC TGGACAGCAA GGATCGGGAA ATCAAGTTCC TGCACGAAAT CAGCCTCGTG
CTCCAGACCT CGGTGGACCT GGATGAAGTG CTGTCGGTGG TCATGACCGC CATCACCGCC
GGCAAGGGGT TCGGCATGAA CCGGGCCTTT CTGCTGCTGA CCGACAAGGA GCGCAAGCAC
CTGCGGGGCT ATCTGGGGGT TGGGCCGCGG AACTACGGCG AGGCGTGGTT CATCTGGGAT
GAGATCAGCC GCGACGACTT CACCCTCAAG GAGATGGCGA AGAACTTCTA CCAGACCAAA
TTCACCAGTG AGAAGCAGAA GTTTCACGAC ATTCTGGAAA ACCTCACCAT CCCCTTGTCG
GAACATGATC ACATCTTGGT CCGTGCGTTG AGGGAGAAGA AACCGCTCCT GGTCGAAAAC
GCTTTCCACA ATCCAGACTG CGACTACTCC CTGACCCAGA CCCTGGGGGT CGACACCTTT
CTCATCACGC CGCTGGTCTC GCGCAACCGG AGAATCGGCG TCATCATTTC CGACAACTGC
GTGACCCATA AACCGATTAC CCCCCAGGAT GTCCAGTCCC TGGAGACCTT CGCCTTTCCC
GTTGCCTTCG CCATCGAACG GGCATCCCTG TACGAACGGC TCCAGGAAGA GCTCCTCAAG
GTGACGGCGG CCAACGTCAA GCTCAAGGAA CAGCAGGAGC TGATCGTCCG GATGGAACGG
ATGGCGCTCG TGGGCAAGAT CACGTCGAGC ATCGCCCACT CCATCCGCAA CCCCCTCATG
ATCATCGGCG GCTTCGCCCG CACGCTTCTC AAGGGCACCG ATGAGGGTGA CCCCCGGCGC
GAGTATCTGG AATCCATCGT CCGCGAAGCC CGACAGTTGG ACGAGGTGCT GGACGAAGTA
CTCAGCTACT CCGACTCCCT CTATCCCACC CTGGACTCAT GGGACGTGAA CCAGTTGGTA
AGCACCGGTT GCCGGGAGCT GGACAGCCGC CTCCAGGAGC GTCGCATTGC CTGCCGGCTC
CGCCTGGACG CCGAACTCCC GTCCGCCCGC ATCGATTACA AACAGGTCTC CTTCTGCCTC
CGCTCAATCC TGACCTCCAG CATGGACCGA ATGCCCGACG GCGGTGAGAT TGTCATCGAA
ACCCGACTGG AAGGCGGGTG GATCGTCGTC GAGGTGCGGG ACACGGGACG GCCCGGCTCC
TCGAACGGAA TGAGCACATT CTCTTCCTTC GCACCGCCCC AGGAACTGGG AGGTGGCCTC
GGCCTGGAAG TCTGCAAGGC AATCATGGAA AAACATGGCA ACAGCCTCAT CATCGAAACG
CCTCCCGACG GGGGGGCCCG CTACGTGCTC AAACTACCGG TAAACAGGGA GGAGGAACCC
CATGGCACGA TTGTTGGTGG TTGA
|
|---|
| Protein sequence | MEWKCCWNRN VIEPADCPNI GEGEEILFSS LQRRVIEKCV DCPLFAEDLK ALRDSGHPLA
AVLPIVVAEL QEQRSRLQSM VGFLDSKDRE IKFLHEISLV LQTSVDLDEV LSVVMTAITA
GKGFGMNRAF LLLTDKERKH LRGYLGVGPR NYGEAWFIWD EISRDDFTLK EMAKNFYQTK
FTSEKQKFHD ILENLTIPLS EHDHILVRAL REKKPLLVEN AFHNPDCDYS LTQTLGVDTF
LITPLVSRNR RIGVIISDNC VTHKPITPQD VQSLETFAFP VAFAIERASL YERLQEELLK
VTAANVKLKE QQELIVRMER MALVGKITSS IAHSIRNPLM IIGGFARTLL KGTDEGDPRR
EYLESIVREA RQLDEVLDEV LSYSDSLYPT LDSWDVNQLV STGCRELDSR LQERRIACRL
RLDAELPSAR IDYKQVSFCL RSILTSSMDR MPDGGEIVIE TRLEGGWIVV EVRDTGRPGS
SNGMSTFSSF APPQELGGGL GLEVCKAIME KHGNSLIIET PPDGGARYVL KLPVNREEEP
HGTIVGG
|
|---|
| |