Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU3250 |
Symbol | pcnB |
ID | 2686371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 3561440 |
End bp | 3562807 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637127943 |
Product | polyA polymerase |
Protein accession | NP_954291 |
Protein GI | 39998340 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATCG AACCGGTCAT CATTCCCCGC GCCAACCACC CCATCTCCCG CTCCCTCGTC AGCCCCAACG CCCTCCGGGT CCTCTACCGT CTCCGGGACA ACGGCTTTAT CGCCTACCTG GTGGGGGGAT GCGTCCGGGA TCTGCTGCTG GGGCGCGAAC CCAAGGATTT CGACGTGGCA ACCGACGCCA CGCCCAACCA GATCAAGCGC ATCTTCCGCA ACTGCCGGCT GGTGGGGCGC CGTTTCAGGC TCGCCCACAT TCACTTTACC GACGAAATCA TCGAGGTGGC CACCTTCCGC GCGTTGTCTC CCCCCGAACA AGGTGAAGGC GAGCCGGTTG CCGATGAGAC TGGACAACGG GGTGGAGATG AAGCGGAACG CCTCCGTCCG CCACGCCACC TGGTGAGCGA CGAGGGAATG GTCCTGCGGG ACAATGTTTT CGGAACCCCG GGCGAGGATG CCCTGCGCCG GGATTTCACC GTCAATGCCC TGGCCTACTG CATCGCCGAC TTTTCGATCA TCGACTACGC GGGGGGCATG GAAGATCTGC AGCGGGGGAT GATCCGCACC ATCGGCGATC CGCGGGTCCG CTTCACCGAG GACCCGGTCC GGATGCTCCG GGCGGTCAGG TTCGCTGCCG TGCTGGGGTT CGCCGTGGAG GAGGAGACCT GGCAGGCGAT GCTCGATCTG GCACCGGCAA TTACCAGGGC GACGGCGCCG CGGCTTTACG AGGAGATGCT CAAGCTCTTC CTGTCGGGGG AAGGTGAGCG GGCCTATCAG CTCCTGCGGC AGACCGGCCT CTTCGCGCAC CTCTTCCCCG GCTTCGAGGC GTGGCTCGGC GAGGAAACCG ACGGGTTCCC CCACGCCCGG ACCGGCAGTG CCCTCGAATG GGTAGACTCA CAGGTGGGCA GCGGCGAGCC GGTGTCACCA CCGCTCCTCC TCGCGCTCCT CTTTGGCGGG TACCTGGAAG AACAGTCCGA ACGCTTCATG GGCCAGGGGG CTTCTCCCCT GGACGCGGTG AGTGCCGCCG TGGCGGCCTT TCTGGGTGAG CAGGCGCCGC TGGTGGCAGT GCCGCACCGG ATCGGGCTTG CCATGCGCGA GATTCTCGCC CTCCAGCAGC GACTGCACAG GATACCCGGC AAACGCCCCC AGGCGGTTCT GGCCCGGGCC AGCTTTGCCG AGGCAATGGC CTACCTCCGC TGCCGTTGCG CCATGAACGG CGAGGACAGC CCGGTTCTCG CGTGGTGGGA GCGCTACGCC CGCGACAGCG TCATGCCTCC CGTGGAACCC TGTTCAGCCG GAGGCGAGAC AAAGAAACCA CGGCGGCGTC GCCGGCGGCG CGGCGTCAGG AAGGCGGCTC CGCAGTGA
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Protein sequence | MSIEPVIIPR ANHPISRSLV SPNALRVLYR LRDNGFIAYL VGGCVRDLLL GREPKDFDVA TDATPNQIKR IFRNCRLVGR RFRLAHIHFT DEIIEVATFR ALSPPEQGEG EPVADETGQR GGDEAERLRP PRHLVSDEGM VLRDNVFGTP GEDALRRDFT VNALAYCIAD FSIIDYAGGM EDLQRGMIRT IGDPRVRFTE DPVRMLRAVR FAAVLGFAVE EETWQAMLDL APAITRATAP RLYEEMLKLF LSGEGERAYQ LLRQTGLFAH LFPGFEAWLG EETDGFPHAR TGSALEWVDS QVGSGEPVSP PLLLALLFGG YLEEQSERFM GQGASPLDAV SAAVAAFLGE QAPLVAVPHR IGLAMREILA LQQRLHRIPG KRPQAVLARA SFAEAMAYLR CRCAMNGEDS PVLAWWERYA RDSVMPPVEP CSAGGETKKP RRRRRRRGVR KAAPQ
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