| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3240 |
|---|
| Symbol | |
|---|
| ID | 2688280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 3553203 |
|---|
| End bp | 3555641 |
|---|
| Gene Length | 2439 bp |
|---|
| Protein Length | 812 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637127933 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | NP_954281 |
|---|
| Protein GI | 39998330 |
|---|
| COG category | [C] Energy production and conversion
[S] Function unknown |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase
[COG5011] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.47861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGCACAC GCTGTGCCGT AACGCCGGAA CTCCGCTTTG TTCTTGCCTT TCCCGACGTC
TACGAGGTCG GCATGAGCCA CCTGGGGCTT CAGATTCTCT ACGGCGTGCT CAACACCCTC
GACGGTGTTG CCGCCGAGCG GGCCTATGCC CCCTGGCCCG ACCGTGAGGC TCAACTGCGG
GCAGAAGGGA TACCGCTGGC CACTCTGGAG AGCGGCACCT CCCTGGATCG TGCCGATATC
GTTGGCTTTA CTCTCCAGTA TGAGCTTTCG TACACAAATA TTCTCAATAT GCTGGATCTG
GCCGGCATCC CCCTGCTCGC GTCAGAGCGG GACGAGCGCC ATCCGCTCAT AATCGGTGGC
GGACCGTGCG CCTGCAACCC GGAGCCCTTG GCGGACTTTT TCGATGCATT TCTCCTGGGT
GACGGAGAAG AGGCGGTCAT CGAAATAGCA GAGGCGTTCC GGGCATGGAA GCGTGCCGGC
GGAGCGCGGT CAGGGCTGCT TGAGCGGCTA GCCGGCATAG CCGGCGTGTA TGTACCCTCT
TTTTTTGCCG TGAGGTACGG GGATAACAAC AGGATCGCCG CCGTGGAGCC GTTGCGCCCC
GACTACGGCC CGGTGAAGCG CCGCTTTCTG GCCGAGCTGG AGCCGGCTGC CTATCCCACT
GCCCCGGTCG TCCCCTTCCT GAAGACAATC CACGACCGGG TCAGTGTCGA GATCAGCCGA
GGCTGCACTC GCGGGTGCCG GTTCTGTCAG GCCGGCTACC TGTACCGGCC GGTGAGGGAG
CGTTCCCCGG AGAAGATCCT GGCGCTGGTG GAGGAGACCC TTCGGGCCAC CGGTTACGAC
GAGATATCGC TGCTGTCGCT CTCCACCGGG GACTATGGCT GCCTTACGCC GTTATTGACC
GAACTTATGG CACGTTACGC CTCGGAGCGG ATCGCCGTGT CGCTTCCGTC GATGCGGGTG
GGAAGCCTCA ACGATGAGCT GGTGGAGGCC ATCCGCACCG TTCGCAAGAC CGGTTTCACC
CTGGCGCCTG AAGCCGGGAG CGAGCGGCTG CGCCGGGTCA TCAACAAGGG AATCTCCGAG
GAGGATTTGC TGCGCAATGC CTTTGAGGCG TACTCCCACG GCTGGCGCCT GATCAAGCTC
TACTTCATGA TCGGTCTGCC GGGCGAGACG GAGGAGGATC TGCACGGGAT CGTGGAGCTT
GCCCGCAAGG TGAAGATGGA GGGGCGGCGG GCCGGTAGCG GAGGCGAGGT GAATGTGTCG
GTCTCGACCT TCGTTCCCAA GGCGCACACC CCCTTCCAGT GGGAGCCCCA GATCCCGGTC
GGCGAGATCC TGGAGAAACA GGGACTTCTG CGTCGTGAGC TCAGGGCGCG CAAGCTGGTT
TTCAAGTGGC ACGATGCGCC TCTCTCCTTT ATGGAAGGGG TCTTCGCCCG GGGCGACCGG
CGGCTTGGGG CCGCCCTTCG CCGGGCGTGG GAACTCGGCT GCCGCTTCGA CGGCTGGGGC
GACAGGTTCG ACGAGGCCGC ATGGCGGACC GCCTTCGAGG AAACCGGTAT CGACCCGGCC
TTCTATCATC GGCGCCGGGA GCCGGATGAG GTTCTTCCCT GGGGTCACCT GGACTTCGGC
GTCACAAGGG AGTTTCTTCT TCGCGAACTG GAACTGTCGC GCCAGGGGGC GGCCACGGAG
GACTGCCGTA CCGGCCGCTG CACCGGCTGC GGTGTCTGTG ATTTCAGCCA GGTGCGGCTG
CGGCTCGCCG ATGACGGCTG GCGGGGTACG ACCACCCGGC GGGAAAAGGA TGATGCGGAA
GATGTCGAAG GGAAGGTAAC GCTGCGGCTC CGTTACACCA AGACCGGGGC CATGCGGTTC
CTGAGTCACC TGGAGATGAT CGGTCTCTTT ACCCGGGCGG TGGGGCGGTC GCGAATCCCG
ATCCGCTTCT CCCGCGGGTT CCATCCTCAC CCCAAATTCT CATTTGCCAC CGCCCTTTCG
GTCGGTGTAG AATCGTGGGC CGAATATCTC GATATGGAGC TTTTCCCCGG CGCCGACCCG
ACGGACATCG GCACGCGCCT CAATGGGGCT CTCCCCGAGG GGGTACGGAT CGTCGAGGCA
TCCGTGATCC CTCCGGGCAG TCCTTCCCTC TCTGTAATAA TGGACAAAGT GCGCTACCGT
GTTACGCTTC CTCCGGAGGC GGCCGTCGGC CTGCCTGAAC TGGCTGCGGC GTTTCTTGCC
CGGGAGAGCG TTCCGCTGCG TCGTGAAAAG AAGGGGCGGG TCCAGGAGTA CGACCTGCGC
CGGGAGCTGG CCGAACTCAC CGTGGAGGGG AACGCCCTGG AGATGGTGAC GGGGCGGGGC
AAACCGCTGG AGTTCGTATC GGCCATCACC GGGCTTGCGC CGGAAGCCCT GGCTGAGGCC
AGGATCGAGA AGCTCCAGGT GCTTTTCAAG GAATCGTGA
|
|---|
| Protein sequence | MGTRCAVTPE LRFVLAFPDV YEVGMSHLGL QILYGVLNTL DGVAAERAYA PWPDREAQLR
AEGIPLATLE SGTSLDRADI VGFTLQYELS YTNILNMLDL AGIPLLASER DERHPLIIGG
GPCACNPEPL ADFFDAFLLG DGEEAVIEIA EAFRAWKRAG GARSGLLERL AGIAGVYVPS
FFAVRYGDNN RIAAVEPLRP DYGPVKRRFL AELEPAAYPT APVVPFLKTI HDRVSVEISR
GCTRGCRFCQ AGYLYRPVRE RSPEKILALV EETLRATGYD EISLLSLSTG DYGCLTPLLT
ELMARYASER IAVSLPSMRV GSLNDELVEA IRTVRKTGFT LAPEAGSERL RRVINKGISE
EDLLRNAFEA YSHGWRLIKL YFMIGLPGET EEDLHGIVEL ARKVKMEGRR AGSGGEVNVS
VSTFVPKAHT PFQWEPQIPV GEILEKQGLL RRELRARKLV FKWHDAPLSF MEGVFARGDR
RLGAALRRAW ELGCRFDGWG DRFDEAAWRT AFEETGIDPA FYHRRREPDE VLPWGHLDFG
VTREFLLREL ELSRQGAATE DCRTGRCTGC GVCDFSQVRL RLADDGWRGT TTRREKDDAE
DVEGKVTLRL RYTKTGAMRF LSHLEMIGLF TRAVGRSRIP IRFSRGFHPH PKFSFATALS
VGVESWAEYL DMELFPGADP TDIGTRLNGA LPEGVRIVEA SVIPPGSPSL SVIMDKVRYR
VTLPPEAAVG LPELAAAFLA RESVPLRREK KGRVQEYDLR RELAELTVEG NALEMVTGRG
KPLEFVSAIT GLAPEALAEA RIEKLQVLFK ES
|
|---|
| |