| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3203 |
|---|
| Symbol | |
|---|
| ID | 2688367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 3509921 |
|---|
| End bp | 3510649 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637127896 |
|---|
| Product | outer membrane lipoprotein carrier protein LolA, putative |
|---|
| Protein accession | NP_954244 |
|---|
| Protein GI | 39998293 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
|---|
| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.412131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTGC CGCGCATACT ATTGCTGTTT GCCGTCACCC TGCTTCTGGG GACAGGTGCC
GCCACGGCGG CGCCGTCAGC CCCCCTGGCC GACGTGGTAG CCACTTTGGA ACAGGGATAC
GCTTCCCTCA AGGACCTGCA GGCATCCTTC ACCCAACGGA CCGAAATGGC GGCGGTCAAG
CGGTCCCAGA CCGGCTCCGG CGAGCTGTTC ATCCGCAAAG GTGCCGGCGA CCGGGCGCTC
TTTCGCTTCA ACTACGTCAA ACCGTCCCAG CAGATCGTCT CCAACGGCAA GACCGTCTGG
TACTATCTGC CCGAGAACCG GCAGGTCATG ACCATGGATG CCTCTGCCCT CTTTGCGGGC
GGCGGGGGGG TCGCCCTTTC CTACCTGACC GGCATAGGCC AGATATCGCG CGACTTCGCC
GTAAGCTTTG CGGGCAACGG ACGCGACGCC AAAGGGAACC ACGTCCTGGA CCTGGTGCCC
AAAAAACAGG GCCAGGCCTT TGCCCGGCTC CAGCTCACCG TTTCGGCCAA GGCGGTCGAA
GAGTACCAAC GGGCGGGCAA AGCCACGGTA CCCTTTCCCA TCGTTTCATC TGTTGTGGTT
GACCAGATGG GGAGCCGCAC GTCCTTCGAA TTCTCGAAAA TACGGGTGAA CCGTGGGCTG
GCCGGTTCTC TCTTTACATT CAAGGCTCCT GCCGGCGTTG AGGTAATCCA GGCACCGGGA
GTCAAATAA
|
|---|
| Protein sequence | MTLPRILLLF AVTLLLGTGA ATAAPSAPLA DVVATLEQGY ASLKDLQASF TQRTEMAAVK
RSQTGSGELF IRKGAGDRAL FRFNYVKPSQ QIVSNGKTVW YYLPENRQVM TMDASALFAG
GGGVALSYLT GIGQISRDFA VSFAGNGRDA KGNHVLDLVP KKQGQAFARL QLTVSAKAVE
EYQRAGKATV PFPIVSSVVV DQMGSRTSFE FSKIRVNRGL AGSLFTFKAP AGVEVIQAPG
VK
|
|---|
| |