| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3160 |
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| Symbol | |
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| ID | 2686768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 3466826 |
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| End bp | 3467578 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637127853 |
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| Product | RNA pseudouridine synthase family protein |
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| Protein accession | NP_954201 |
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| Protein GI | 39998250 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.466098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGATCC TCTTTCGCGA CCAATACCTG GTGGCCGTGC ACAAGCCGGC CGGGCTCCTG
GTGCACCGAA GCCCCATCGA CCGCCATGAA ACCCGTTTCG CCCTCCAGGA GGTGCGCGAC
CTCCTCGGCC GCCGGGTCTA TCCCGTTCAT CGCCTCGACA AGCCCACCTC CGGCGTCCTG
GTGTTCGCCC TGGACCCGGC AACGGCCCGT TCGCTCGGCG ATGCCTTCGC CGGCGGCCGG
GTGAACAAGA CCTACCTGGC GGTCACCCGG GGGATTGTCC CGCCGGAGGG AATCATTGAC
CACTCCCTGA GCGAAGAACC GGACCGGCTG GACGGTGCGA AGAGCTCACC AGCAGCGCCT
CAGCCGGCGG TCACCGTTTT CCGGCGACTC GCGGAAGCAG AACTGCCCGT GGTAACGGGG
CGCTATGCCT CCTCCCGCTA CTCACTTGCG GAACTAACAC CCCACACCGG CCGCCGCCAC
CAGCTGCGGC GCCACATGAA GCACATCTTC CACCCGATCA TCGGCGACAC CACCTACGGC
GAAGGGCGCC ACAACCGCTT CTTCCGGGAA GAGTTCGGCT GCGGCCGTCT CCTGCTCCAT
GCCGCGGAGC TTTCGCTGCC GCATCCCGCA AGCGGAGAAA CCCTGACCAT CGCCGCACCG
CCGGACCGGG AGCTCGCCCG CCTCCTGGAT CGCCTCGGCT GGCTGGCTGC GGCGACCGGT
CGCGGGCGGC CGGGCATGCC TGCGCCGCCT TGA
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| Protein sequence | MEILFRDQYL VAVHKPAGLL VHRSPIDRHE TRFALQEVRD LLGRRVYPVH RLDKPTSGVL
VFALDPATAR SLGDAFAGGR VNKTYLAVTR GIVPPEGIID HSLSEEPDRL DGAKSSPAAP
QPAVTVFRRL AEAELPVVTG RYASSRYSLA ELTPHTGRRH QLRRHMKHIF HPIIGDTTYG
EGRHNRFFRE EFGCGRLLLH AAELSLPHPA SGETLTIAAP PDRELARLLD RLGWLAAATG
RGRPGMPAPP
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