Gene GSU3148 details

Gene Information

• Locus tag: GSU3148
• ID: 2688380
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 3455690
• End bp: 3457705
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637127841
• Product: sensor histidine kinase
• Protein accession: NP_954189
• Protein GI: 39998238
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase)

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACAGCC CGCCCCTCTA TAACAGCAGG ATCTTCGATA CCTATCTGAA GCTCCTCGCA 
CAACGGTATC CTCACGTTCG GACCGATGAG GTGCTCAGCC ATGCCGGGAT GTCTGAGCAC 
GAGGTCGCGG ACCCCGGCCA GTGGTTCACC CAGCAGCAGG CGGATCGCTT TCACGAGGTG 
CTCACGCGGA TGACCGGCAA CCCCGGCATC GCTCGCGAGG CGGGCCGTTA CGCCGCATCG 
CCCGAAGCGC TCGGCCTTGT ACGGCAGTAC GTCCTCGGAC TGGTGGGGCC TGCCCTCGGC 
TATGCCCTCC TCAACCGCAC GGCAGCCCTC TTCACCCGGT CGTCGACGTT CGAGTCCCGG 
AAGATCGGGG ACAACAGGAT CGAGGTCACG GTTCGCTTCA GGCCGGGGGT GAGTGAGCGG 
CCATACCAGT GCGCCAACCG CACGGGATTC CTCGAGGCGC TTGTCGTTAT CTTCAGCCGG 
TGTCTTCCGG AAATCGAGCA TCCCGAGTGC ATTTTTCAGG GCGGAGGGGT CTGTCGCTAC 
ATAATTTCCT GGCCTAAGGG GCATGCCGAT CTCTGGCGGA CGGTGCGCCG CTGGGGGCTC 
CTCGGCGGGA CGGTCCTCGG GCTTGCCACT CTTCTCCTGA GCCCCTCTCT GTTCCCCGTT 
GTGGCAGCGG TGGCCATTCC CCTGGTCCTG CTGTTTTTTC TTGCCGCCGA GCGGGCCGAG 
AACAAGGATT TGAGCGCGGC CGTCGACAAC CTGCGGGATT CTACCGAAAA GCTGCTCGGC 
CAGTCTCAGT CAAACAGCGA CAATGCGCTG CTCGTGAGTG AAATCGGGCA GGTGGTCAGC 
AGTAAGAGCG ATATTGAGCA CATTCTGACC GCTATTGCCG TCCTACTGGA GAAGCGGCTC 
GACTACGACC GGGGCGTGAT CATGATGGCC GATGCCGGCG GGAGCGCTCT CAGGGTGCTG 
GCCAGCTACG GGTTCGACGA GGCGGGTCGG CGGGTCATGC ACGAAACGCC CATTGCGCTG 
GACGGCGTCG GTCCCCGCGG CGTCGTGGCC GCTTCGTTCC TCGACCAGAA GCCATTCCTG 
GTGAACGACC TTGATGAGAT TAATCATCTC ATCCCGCCGC TGCATCGGGA GTTGGGCCGC 
CGGCTGGGCA TTCGTTCCTT CATCAGCTGC CCCATTGTTT GCGAGGGGCA ATCCCTCGGC 
GTACTGGCGG TGGATACGAT ACGCACCGGC AGGCCGCTGC TCCAGAGCGA CCTGAGCCTC 
CTTATGGGGA TTGCGCCGGT GATCGGCATC AGCATTCACA ACGCCGAGCA CCTGGCCCGG 
GAACAACGGC AGGCTGCCCT GCTGGAGGTT GCCAACCAGG AGTTGGAGGC GTTCTGCTAT 
ACCGTTGCCC ACGACCTCCG GGCACCACTC CGGGCCATCA ACGGCTATTG CGCCGTCATC 
CGTGAGGAGT GCGACGACCG CCTCCCGCCG CCCTCTCCGG TCTATTTTTC CCGGATCGGC 
GCGGCAGCGG TGCGGATGGG GGAGTTGATC GACGATCTGC TTGCTCTGTA CCGGGTAACC 
CGCAGCGAAC TGGTATGGGA GGAGATTGAT CTGAGCGCCC TGGTGGCTGA GGTGGCGGAG 
GAGCTGCAGC AGCGGGAGGC AGCCCGCTCG GTGGAGTTTG CCATTGCCGC CGGCGTCACT 
GTTCGGGGAG ATCGGAAGTT GCTGCGGATC GCTCTGGAAA ACCTGCTGGG CAATGCCTTG 
AAGTATACCG GCATGCGCCC CCGGGCACTC ATCGAATTCG GCACGGCAGA GGTAGGCGGT 
GTTACTGCCT GCTTCATCCG GGACAATGGC ACCGGTTTCA ACATGCGGTA TGTCGACAAG 
TTATTCCGGC CCTTCCAACG GCTCCACCGG GACGATGAAT TCGAGGGGAC CGGCATCGGC 
TTGGCTACCG TGCACAGGAT TGTGAGCCGC CACGGCGGAC GGGTCTGGGC CGAAGCCGAA 
GAGGGTCGGG GCGCCGTATT CTACATTGCC CTTTGA 

 

Protein sequence

MDSPPLYNSR IFDTYLKLLA QRYPHVRTDE VLSHAGMSEH EVADPGQWFT QQQADRFHEV 
LTRMTGNPGI AREAGRYAAS PEALGLVRQY VLGLVGPALG YALLNRTAAL FTRSSTFESR 
KIGDNRIEVT VRFRPGVSER PYQCANRTGF LEALVVIFSR CLPEIEHPEC IFQGGGVCRY 
IISWPKGHAD LWRTVRRWGL LGGTVLGLAT LLLSPSLFPV VAAVAIPLVL LFFLAAERAE 
NKDLSAAVDN LRDSTEKLLG QSQSNSDNAL LVSEIGQVVS SKSDIEHILT AIAVLLEKRL 
DYDRGVIMMA DAGGSALRVL ASYGFDEAGR RVMHETPIAL DGVGPRGVVA ASFLDQKPFL 
VNDLDEINHL IPPLHRELGR RLGIRSFISC PIVCEGQSLG VLAVDTIRTG RPLLQSDLSL 
LMGIAPVIGI SIHNAEHLAR EQRQAALLEV ANQELEAFCY TVAHDLRAPL RAINGYCAVI 
REECDDRLPP PSPVYFSRIG AAAVRMGELI DDLLALYRVT RSELVWEEID LSALVAEVAE 
ELQQREAARS VEFAIAAGVT VRGDRKLLRI ALENLLGNAL KYTGMRPRAL IEFGTAEVGG 
VTACFIRDNG TGFNMRYVDK LFRPFQRLHR DDEFEGTGIG LATVHRIVSR HGGRVWAEAE 
EGRGAVFYIA L