| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3129 |
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| Symbol | |
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| ID | 2687697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 3429286 |
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| End bp | 3430644 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637127822 |
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| Product | MATE efflux family protein |
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| Protein accession | NP_954170 |
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| Protein GI | 39998219 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAGA GAGGGTTCAG GGCACGGTAC GCAAGGGAAC GGAGCAAACG CGCCTCCATC
CGCCGCAACG TTATGAACCT GTCGCTGCCG GTACTCCTGT CCTCGCTCTT CCAGCGGCTC
GTGGCCATCG TCGACATCTT TCTCGTGGGG GGGCTGGGAG CCGCGGCCAT TGCCGCCACG
GGACTCGGCC AGCTTCTCGT GTTCGTGACG ATGACCGTGT TCTGGGGGCT TGCCACCGGC
ACCACGGTAG TGATCGCCCA CCTCCGGGGG GCGGGACAGC GCCGGGAAGC GCGGCGGGCG
GCCTTTGCGG CGAGTCTCGC CTGCGCCGGC ATGACGGCGG CGGCCTCCGC GCTCGGCTGG
TTCTTCAGCG ACGACCTGGC CGCGTTCCTC GGTGCCCGGG ACGACGTGCT CCACCTGGCA
GCCGGCTATA CCCGGCTGGT CTTCCTCTAT CTTGCCTTTA CCACTGGCCT CAACATCCTT
TCGGCCATCA TGCACGGCAT CGGCAACACC CGCACGCCCA TGCAGGCCAT TATCTTGGTC
AACATTCTCC ACGTGCTCAT CGCCTGGCCC CTCATCTACG GCAAGCTCGG TCTCCCCGCC
ATGGGGGTCA CCGGCGCGGC CATCGCCATC AATGCTTCCG AGGCCATCGG CTTTCTCTAC
CTGCTGGTGC AAGCCCTGAG GCTGGACTAC ATCCGCATCG GCCGACCCGA CACGGGACTC
ATGGGCCGCA TCTGGCGAGT GGGGTGGCCC GTGGCCCTGG AGCGAATTGC CCAGCAGGGG
GGACAGCTCT TCTACTCGAA ATTCATCATC GGCTACGGCA CCGCCGCCTA CGCAGCTCAC
CAGATCGGAC TCTCCATCGA ATCCCTGTCC TTCATGCCGG GTGCGGGCAT GGGGATCGCC
GCCGCCACCC TCATGGGACA GGCCCTGGGG GCAAAAAAAT ACCGCCGGGC GCGGATCAGC
CATCGTGAGG CCCTGCGCCT GGCGGTTATT GTCATGGGGA CCATGGCGGC CGTCTTCCTG
ACAGTACCCG GGCCGCTCAT CGGGCTCTTC ACCCGGGACC CGGCGGTCAT CGAAAACGGC
ATTGTGTTCC TGCGGCTGGT GGCCTTCGCC CAAGTGCCGT TGGCCCTCTC CTTCGTCTAT
GCCGGGAGCC TGCGCGGCAC CGGCGACACC TTCTACGTCT TCCTGGTCAC CCTCGGCGTC
ATGTGGGGGG TGCGGGTCTT TCTCTCATGG GTGGCGTCCG ACTGGTGCCA CCTTTCCCTC
TACGCCGTCT GGGGCGTCTT CGTCATCGAC TGGTACGTGC GAGCCGCCGC CTTCTGGTGG
CGGTACCGCC AGCGGGACCT GCACGCGGTC ATCATCTGA
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| Protein sequence | MAKRGFRARY ARERSKRASI RRNVMNLSLP VLLSSLFQRL VAIVDIFLVG GLGAAAIAAT
GLGQLLVFVT MTVFWGLATG TTVVIAHLRG AGQRREARRA AFAASLACAG MTAAASALGW
FFSDDLAAFL GARDDVLHLA AGYTRLVFLY LAFTTGLNIL SAIMHGIGNT RTPMQAIILV
NILHVLIAWP LIYGKLGLPA MGVTGAAIAI NASEAIGFLY LLVQALRLDY IRIGRPDTGL
MGRIWRVGWP VALERIAQQG GQLFYSKFII GYGTAAYAAH QIGLSIESLS FMPGAGMGIA
AATLMGQALG AKKYRRARIS HREALRLAVI VMGTMAAVFL TVPGPLIGLF TRDPAVIENG
IVFLRLVAFA QVPLALSFVY AGSLRGTGDT FYVFLVTLGV MWGVRVFLSW VASDWCHLSL
YAVWGVFVID WYVRAAAFWW RYRQRDLHAV II
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