| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3016 |
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| Symbol | |
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| ID | 2686663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 3305627 |
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| End bp | 3311104 |
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| Gene Length | 5478 bp |
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| Protein Length | 1825 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637127709 |
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| Product | hypothetical protein |
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| Protein accession | NP_954058 |
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| Protein GI | 39998107 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4412] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAGTT GGGGGAGAGG GATTTGGCGG CTGGCTGTAA TGCGCGGTGG ACTGGTGGTT
GTGGTTTCTG CCCTGCTGCT CTTCGGGGGG GCGGCTGTGG CCATGCAACT CCCGGAGCCG
GGCGAGATCG AGCGGCTCAA GGAGTCGGGC GAGTTCGAGA ACCGGAAAAA GTTCGCCGAG
GAGATCGGCA ACCACAAGAT TGATCCCGAG CTGGTGAAGA GGGCCGTCAA CAAGGCTAAG
AAGAAAGCCC TCCGCCAGCA GGGGTTCACG GCAAACGAGG CCGACCAGAT GGCGGGAGCC
TACGCACCGC CTCCCGCCTG GAGCGGCATG CCCACCACTG GCAGCGTGAA ACTCTTTGCC
CTCCTCATCG ACTTCTCCGA TTACCCTGCC GTAACGCCCC AGGCCACGGT CCATGACAAG
CTCTTCGGCG CCGGTAACCC AGCCGAAGCC CCCTACGAGA GTCTCGCCGC ATTCTACAGC
CGCTCATCCT ACGGCCTTCT CGATTTTTCC GGCGGGACGA CGCTGGGGTG GTACCGGCCC
GGCTACAGCC GGAGTGCAGT AACCCAGACG CCCGCCGGCC GCGAGAACCT CATCAAGGAG
GCCCTCAACT ACTTTAATAC CCAGGGCCAC GACTTCTCCC AGTACGACAA CAACAGCGAC
GGCAAGATCG ACTACTTCCT CGTGATCTGG ACCGGGCCGG CCGGCCCCTG GGCATCGTTC
TGGTGGGGCT ACGCCACCTC GTTTTCGGAC TTCAACTATC TCCTCGACGG GAAGCGCCTC
GGCAAGTACT CCTGGCAGTG GGAGGGGAGC CCCTACGGTC AGCAGTTCGG CCCCCTGGTC
ACGATTCACG AGACCGGCCA TGCCCTGGGG CTTCCCGACT ACTACGACTA CAGTGCTACT
GCAGGACCCA AGGGCGGGGT TGGCGGCCTC GACATGATGG ACCACAACTG GGGGGACCAC
AGCGCCTTCA GCAAGTGGGT TCTGGACTGG ATCGACCCGG TGGTGGTGGC CGGCGGCTCC
CAGACCATTA CCCTCAACCC CTCCGCCACC TCCACCGACG CGGTCCTCAT CATGCCGGGG
ATCACCTCCA GCGACCTCTT CGACGAGTAT TTCCTGGTCC AGAACCGGCA CCGCGCCGGC
AACGACGTCC ACTACCCCAA CGACGGGCTC CTCATCTGGC ATGTGGATGC GACACTCAAC
TCCTCCGGGA CCAACTACCT CTATAACAAT TCGGACACCG CCCGCAAACT GCTGCGGCTC
ATGGAGGCCG ACGGCCTGGA GGAGATAGAG AAGAACCTTT CCTACAACAC TGCCGACGCG
GGGGACTACT ACGTTCCCGG TGCTTCCTTC GGTCCGGCCA CGGTTCCGTC GAGCAGGAGC
TACGGGGGGC TCAATACCGG TGTCACGGTC ACCAATATCA CCCGTTCCGG CAACCAGGTG
ACGGCAGCGT TCAGCATCGG CGCCGCTGCT CCCTCGGGGA CCGTCAAGAT CAACGGCGGC
GCCGCGGCCA CCAATTCTAC GACCGTTACC CTGAACCTCA CGGCGGGGGG CGGGGCCAAC
CCGGTCTCCC AGATGCGCTT CAGCAACGAT GACGCCACCT GGAGCGCCTG GGAAGCGTAC
AAAACCACCA GGACCGGCTG GACCATCCCT GCCAGCGACG GCGAGAAGAC GGTTTATGCC
CAGTTCCGGG ACAACCTCCA GATCGAGTCG TCCAGCTACT ACGATACCAT TGACCTCGAC
ACGGTTGCGC CGGTGGCGGT GGTTGTGGCC AACAGCCCCC TGGCGGGTCC GACCAAGGCG
ACCACGTTCG GCTTTGGCGT GAACGGCGGC GACGTCGTTT CATACAAGTA CAAGATCAAT
AGCGGTGCCT GGTCGGCCGA GATCCCGGTT AAGACCTCCA TGAATATCGT GGGGTTGGTA
AATGGTTCCT ATACCCTTTC GGTTGTCGGC AAAGATGCCG CAGGAAACTG GCAGTCCACG
GCTTCGCCTA CCACTGTTTC CTGGGATGTT GACACCATCA AGCCGGTGAC GACGGCCTCT
CCGGCGGGTG GGACCTATGC CGCCGCCCAG ACCGTGACCC TTTCCTCCAG TGAAACCGCC
ACCATTTACT ACACCACCAA TGGAACAACG CCGACGACCG CCTCGCCCCA GTACAGCGGG
CCCATCACGG TGACTCCCAC GTCCACACTC AAGTTTTTTG CCGTGGATCA GGCCGGCAAT
GCGGAAGCAG TGAAGAGCCT GGTTTACCAG CTTCCTCCCG TGGCAGCGCT GACAGGTGTG
CCGGCCGCCA GGACCAAGGC AACGGTCGCA GCCATCACGG TGGGGGGGGC TACGGCCGTT
GCATACAAAT TCCGGCTCGA CAATGGCACT TGGTCGGCTG AAACGCCAAT TGCCACGAAG
ATCAGCCTAT CCGCGCTGGC CGCCGGCTCC CACACGGTGG ACGTGATTGC CAAAAACGCG
CTTGGCGCCT GGCAGACGAC GGCGACCACC GCCTCCTGGA CGGTGGACCT TGCCGCTCCG
GTTACAACCG CGTCACTCGC CGCAGGGATC TACAAGCCGG GCCAGACAGT GAGCCTCTCC
GCCAGTGAAA CCGCCACCGT CTATTACACG ACGAACGGGA CCACGCCGAC CACCGCGTCG
GCCAAGTACT CGGCTCCGCT GGCCATCAAT ACGTCCACGA CCCTGAAATT CTTCGCCGTT
GACCAAGCCG GGAATGCGGA GGCGATAAAA ACAAACATCT ATACCATCAC CCTGGTCAGC
GGGACTCCTC CGACCACGAC GAAGCTTGCC ACCGCGACCC TGACGGTGGC GGGCATCGGT
GTCTCGGCCT ACAAATACTC GCTTGACGGC GGAGCACTGT CGGCCGAAAT ACCGGTTGCC
ACCAAAATCA GCCTGACCGC CCTTGGGACC GGTTTGCACA CGGTATCGGT AATCGGCAAA
ACCGCAGCAG GGGTATGGCA GGTAGCCCCG ACCGCTGTCA GCTGGACGGT CGAGCAGACC
GCGCCGACCA CCACTGCCTC CCCTGCCGGC GGCACCTATG CCGCATCCCA GACCGTCACC
CTGACGGCGG ACGAGACCGC GACCATTTAC TATACGATCA CCGGCCTTGC ACCCACGACC
TCTTCGGCAA AGTATACAGG CCCGATCACG GTTGCTCCGA CCAAGGTGCT CAAGTTCTTT
GCCGTGGACC AGGCGGGCAA CGCGGAAGCG GTGAAGACCG AGATTTACGC TTTGCCTGTC
ACGGCAATTA TTGCCGGAAC ACCGGCAGCG AAGACCAAGT ACACGACCGC TACCCTGACG
GTGGGAGGGA GCGGAGTGGT AGCCTACAAA CGGAGTGTGG ACGGTGGTGC GTGGTCGGCG
GAAACCCCGG TTGCGACCAA GATCGCACTG ACCGGCCTTG CCGCCGGCGC CCACAGGGTG
GATGTCATTG CCAAGAACGC CGCCGGCGGG TGGCAGGATG ATCAGGCCCC GACCACGGTC
CAGTGGACGG TTGATCTAAC TCCTCCAGTT ACCACCGCAT CACCGGCGGG AGGGACCTAT
GCGACGCCCC AGACCGTAAA CCTTTCGGCC GACGAGACGG CCACCATCTA CTACACGACG
AACGGGACGA CTCCCACGAC CGCGTCGGCC AAATATGTCG GGCCGATTCC GTTGCCGGCC
ACCGCCACCC TCAAGTACTT CGCCATTGAC CCCGCAGGCA ATGCCGAGGC GGTGAAGACC
CAGAGCTACG CCCTTCCGCC GTTGGCCGTG ATCAACGGCG TACCTGTTGC GAGCAAGGCT
ACGTCCGTCA CGCTCACCAT CGGTGGTGTT GGTGTGGTTG CCTATAAATA CAAGCTCGAC
GGCGGCTCCT GGTCCGCCGA GATCCCGGTG GCGACAAAAA CGGCCATAAC CGGCCTTTCG
GAAGGGGCGC ATACCGTCTC GGTCATTGGG AAGAGCGTGG CGGGCACGTG GCAGGCTACG
TCGGTTGCCT CCTCGAAGTC CTGGATCGTC GACCTCACTG CTCCCACGAC GGCCGCCTCG
CTTGCCGCCG GAGTCTACAA GGGGGGGCAG GCAGTCACGC TGTCGCCCGA CGAGACGGCC
ACCGTCTACT ACACGACCAA CGGCACAACA CCCACGACCG CGTCTGCCAA GTACACCGCG
CCGCTGACCG TTAATGCTAC GTCAACGCTG AAATTTTTCG CAATCGATAC GGCGGGGAAC
GTCGAGGCGG TCAAGACCTT CTCTTACGTC ATCGTAACCC TGGCCGGTGC ACCGGGCGGC
ACAACCAAGC TCACGAGCGC CACTCTGACC GTGGGCGGCT CCGGTGTTGC CGCCTACAAG
TTCAAGCTCG ACAACGGGGC CTGGTCGGCC GAGACGCCGC TGGCGACCAA AATCTCCCTT
GCCGGTCTTG CTGCCGGAAC TCACACGGTT TCCGTGGTCG GCAGGAATGG TTCCGGCGTC
TGGCAGGCCA ATGCCGACGC GACCACAGCT TCCTGGACCG TCGAGGTGGC GCCGCCTGTA
ACCAGTGCCT CGCCGGCGGG GGGCACCTAT GATGCGCCCC AGGTGGTAAC TCTCTCGGCC
AATGAGACGG CCACCATCTA CTACACCCTC ACCGGTGCCG CGCCGACCAC CGCCTCGTCC
AAATACGCGG CGCCTGTCTC CGTTGCCCCC GGCAAAACCC TGAAGTTCTT CGCCGTTGAT
CAGCACGGCA ACGCCGAGGC GGTTAAAACC GAAATTTATG CTCCGTCTCC TCTCGCGGTA
CTTTCCGGGA CGCCGGCGAC TTTTTCCCGT GCCACCTCAG CGACGCTCAC GGTCGGCGGC
ACCGGGGTGG TCGCCTACAG GTGGAAGCTC GATAGCGGCG CCTGGTCTTC GGAAACCCCG
GTTGCCACGA AAATTGTTCT TTCCGGCCTC GCCTCCGGTT CCCATGCGGT TGCCGTCCTT
GGCAAAAACC TGGTCGGAAC CTGGCAGGAT GTGCCCACTG CCGTCGCGTG GACGGTTGAT
ATTTCCGCGC CGGTGACCAC CGCCTCGGTG CCCGGCGGAA CCTATGCGAG TGCCCAGAGC
GTAGAGCTTT ACTCCAGCGA GACGGCCACC ATTTACTACA CTGTCAACGG TGCGGCGCCG
ACCACGGCTT CGCCGAAATA TACCGGCCCG ATCGTCATCG GTACGACCCA GAGCCTCAAA
TACTTTGCTG TCGATCAGGC AGGCAACGTC GAGGGGGTCA AGGCACAATC CTTCACGATA
AAGCCGGCAG CCGTCATCAA TGGTATTCCG GCTGATCCTA CCACTGCGAC AACGGCGACC
TTTACCGTCG GCGGACCATA CGTGGTTTCC TACAAGTACA AGCTCGACAA TGGCGTCTGG
TCAGTCGAGA TCCCCGTTAC GCAGGCACGG AGTCTTGCGG GGCTTGCTGA TGGAACGCAT
ATGCTTTCGG TGCTGGGCAA AAATGCTGGG GGCACGTGGC AGACCGTAGA GACAACGGCT
GTCTGGACGA TCCAATAG
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| Protein sequence | MGSWGRGIWR LAVMRGGLVV VVSALLLFGG AAVAMQLPEP GEIERLKESG EFENRKKFAE
EIGNHKIDPE LVKRAVNKAK KKALRQQGFT ANEADQMAGA YAPPPAWSGM PTTGSVKLFA
LLIDFSDYPA VTPQATVHDK LFGAGNPAEA PYESLAAFYS RSSYGLLDFS GGTTLGWYRP
GYSRSAVTQT PAGRENLIKE ALNYFNTQGH DFSQYDNNSD GKIDYFLVIW TGPAGPWASF
WWGYATSFSD FNYLLDGKRL GKYSWQWEGS PYGQQFGPLV TIHETGHALG LPDYYDYSAT
AGPKGGVGGL DMMDHNWGDH SAFSKWVLDW IDPVVVAGGS QTITLNPSAT STDAVLIMPG
ITSSDLFDEY FLVQNRHRAG NDVHYPNDGL LIWHVDATLN SSGTNYLYNN SDTARKLLRL
MEADGLEEIE KNLSYNTADA GDYYVPGASF GPATVPSSRS YGGLNTGVTV TNITRSGNQV
TAAFSIGAAA PSGTVKINGG AAATNSTTVT LNLTAGGGAN PVSQMRFSND DATWSAWEAY
KTTRTGWTIP ASDGEKTVYA QFRDNLQIES SSYYDTIDLD TVAPVAVVVA NSPLAGPTKA
TTFGFGVNGG DVVSYKYKIN SGAWSAEIPV KTSMNIVGLV NGSYTLSVVG KDAAGNWQST
ASPTTVSWDV DTIKPVTTAS PAGGTYAAAQ TVTLSSSETA TIYYTTNGTT PTTASPQYSG
PITVTPTSTL KFFAVDQAGN AEAVKSLVYQ LPPVAALTGV PAARTKATVA AITVGGATAV
AYKFRLDNGT WSAETPIATK ISLSALAAGS HTVDVIAKNA LGAWQTTATT ASWTVDLAAP
VTTASLAAGI YKPGQTVSLS ASETATVYYT TNGTTPTTAS AKYSAPLAIN TSTTLKFFAV
DQAGNAEAIK TNIYTITLVS GTPPTTTKLA TATLTVAGIG VSAYKYSLDG GALSAEIPVA
TKISLTALGT GLHTVSVIGK TAAGVWQVAP TAVSWTVEQT APTTTASPAG GTYAASQTVT
LTADETATIY YTITGLAPTT SSAKYTGPIT VAPTKVLKFF AVDQAGNAEA VKTEIYALPV
TAIIAGTPAA KTKYTTATLT VGGSGVVAYK RSVDGGAWSA ETPVATKIAL TGLAAGAHRV
DVIAKNAAGG WQDDQAPTTV QWTVDLTPPV TTASPAGGTY ATPQTVNLSA DETATIYYTT
NGTTPTTASA KYVGPIPLPA TATLKYFAID PAGNAEAVKT QSYALPPLAV INGVPVASKA
TSVTLTIGGV GVVAYKYKLD GGSWSAEIPV ATKTAITGLS EGAHTVSVIG KSVAGTWQAT
SVASSKSWIV DLTAPTTAAS LAAGVYKGGQ AVTLSPDETA TVYYTTNGTT PTTASAKYTA
PLTVNATSTL KFFAIDTAGN VEAVKTFSYV IVTLAGAPGG TTKLTSATLT VGGSGVAAYK
FKLDNGAWSA ETPLATKISL AGLAAGTHTV SVVGRNGSGV WQANADATTA SWTVEVAPPV
TSASPAGGTY DAPQVVTLSA NETATIYYTL TGAAPTTASS KYAAPVSVAP GKTLKFFAVD
QHGNAEAVKT EIYAPSPLAV LSGTPATFSR ATSATLTVGG TGVVAYRWKL DSGAWSSETP
VATKIVLSGL ASGSHAVAVL GKNLVGTWQD VPTAVAWTVD ISAPVTTASV PGGTYASAQS
VELYSSETAT IYYTVNGAAP TTASPKYTGP IVIGTTQSLK YFAVDQAGNV EGVKAQSFTI
KPAAVINGIP ADPTTATTAT FTVGGPYVVS YKYKLDNGVW SVEIPVTQAR SLAGLADGTH
MLSVLGKNAG GTWQTVETTA VWTIQ
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