Gene GSU3009 details

Gene Information

• Locus tag: GSU3009
• Symbol: cobT
• ID: 2686694
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 3301289
• End bp: 3302347
• Gene Length: 1059 bp
• Protein Length: 352 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637127702
• Product: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
• Protein accession: NP_954051
• Protein GI: 39998100
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2038] NaMN:DMB phosphoribosyltransferase
• TIGRFAM ID: [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCTGC TGACCGAAGC CCTGTCAAAA ATATGTCCCG TAGATGCCGA ACTCATGGCC 
CAGGCCCAGG CGCGGCTTGA CAACAAGACC AAACCCATTG GCTCCCTCGG ACGGTTGGAG 
GAGTTCGCCC GGCGCATGGT GGCCATCACC GGCAGCGTTG CGCCCGATAC GAAGAAGAAG 
GTGGTCTTCA CCTTTGCCGG TGATCATGGC GTGACCGATG AAGGTGTGTC GGCCTTTCCC 
CGGGAAGTGA CCCCCCAGAT GGTCTATAAT TTCCTGCGGG GAGGAGCCGG CATCAATGTC 
CTTGCGCGCC ACGTGGGAGC CCAGGTACGG GTGGTCGACA TCGGGGTGGA TCACGATTTC 
GGCGACACCC CCGGCCTCAT TGTCCGGAAG GTGGCCCGGG GCACCCGTAA TTTCGCTCGA 
GGCCCGGCCA TGACCAGGGA GGAGGCGGTC GCCGCCCTGG AGGTGGGGAT AGATCTGGCG 
AATGAGGCCA AGCGGGAAGG GATCGCCCTG GTCGGTACCG GCGAGATGGG TATCGGTAAC 
ACTACCCCGT CGGCTGCCAT TATCGCCGCC TTCTCGGGGC TGCCGGTCCC GGCGGTGACC 
CACCGGGGGA CCGGCATCGG CGATGAGGCC CTTGCCAACA AGGTCCGGGT TATCGAGGCG 
GGGCTGGCCC TGAACCAACC CGATCCGAAA GATCCTATCG ATGTGCTGGC AAAAGTCGGA 
GGACTGGAGA TCGCCGGCAT TGCAGGCCTG ATCCTCGGCT GCGCCGCAAA CCGGCTGCCG 
GTGGTGGTGG ACGGCTTCAT CTCCACGGCC GGGGCCCTGG TGGCCTGCGA GCTCAATCCC 
CATGTGCGGG ATTACCTCTT TGCGGCCCAC CAGTCGGTGG AAGTGGGGCA CCGGGTCATG 
CTCGACCGCA TCGGCGCCGC CCCGATCCTG GACCTCCAGC TGCGGCTCGG CGAGGGGACT 
GGTGGGGCAC TGGCCATGGG ACTCATCGAG GCCGGAGTCA GAATTTTGAC GGAAATGGCC 
ACCTTTGAGG AAGCGGGCGT GGCGGAAGGG GACTATTGA 

 

Protein sequence

MTLLTEALSK ICPVDAELMA QAQARLDNKT KPIGSLGRLE EFARRMVAIT GSVAPDTKKK 
VVFTFAGDHG VTDEGVSAFP REVTPQMVYN FLRGGAGINV LARHVGAQVR VVDIGVDHDF 
GDTPGLIVRK VARGTRNFAR GPAMTREEAV AALEVGIDLA NEAKREGIAL VGTGEMGIGN 
TTPSAAIIAA FSGLPVPAVT HRGTGIGDEA LANKVRVIEA GLALNQPDPK DPIDVLAKVG 
GLEIAGIAGL ILGCAANRLP VVVDGFISTA GALVACELNP HVRDYLFAAH QSVEVGHRVM 
LDRIGAAPIL DLQLRLGEGT GGALAMGLIE AGVRILTEMA TFEEAGVAEG DY