Gene GSU2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU2980 
Symbol 
ID2687357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand- 
Start bp3271194 
End bp3271613 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content60% 
IMG OID637127673 
Productnickel responsive regulator 
Protein accessionNP_954022 
Protein GI39998071 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGAAA CCATCAGATT CGGCGTATCC ATCGACGAGA AGCTGCTGGA GAGCTTTGAC 
GGGCTCATCG AGGAGAAGGG GTACATGAAC CGCTCCGAAG CGATCCGCGA CCTGATCCGC 
GCGGCATTGG TGGAGCTGAA GTGGGAAGTG GGAGACGAGG AGACCGTGGG TACGGTGACG 
CTCGTCTACG ATCACCATGT CCGCGACCTT TCCGATAAGT TGACCGAACA GCAACACGCT 
CACCACGACA AGGTCATCTC GGCCCTCCAC GTCCATCTGG ATGCCCACAA CTGTCTGGAG 
GTCCTGGTGG TGCGCGGCAA GGCCCGGGAG GTGAAGAAGA TCGCCGACGA GCTCATCGGC 
GTGAAGGGGG TTAAGCACGG CAAGCTGGTC ATGACCACCA CCGGCGAGGA GTTGCACTGA
 
Protein sequence
MGETIRFGVS IDEKLLESFD GLIEEKGYMN RSEAIRDLIR AALVELKWEV GDEETVGTVT 
LVYDHHVRDL SDKLTEQQHA HHDKVISALH VHLDAHNCLE VLVVRGKARE VKKIADELIG 
VKGVKHGKLV MTTTGEELH