| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2939 |
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| Symbol | |
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| ID | 2688436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 3234920 |
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| End bp | 3236140 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637127632 |
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| Product | outer membrane porin FmdC, putative |
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| Protein accession | NP_953981 |
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| Protein GI | 39998030 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.440983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATA TGCGCAAGAT ATCGACCATC TCCGGCGTCG CCCTCGGTAC GGCCCTCCTG
GCCGGCACGG CGTTCGCCGG TCCCCGGATC ACCTTTGGCC CCGAAGACCA GGGCGCCCTC
CAGATCGACT ACAAGGGCCA GTTCCAGATG TCGATCCGCG ACAACGGCTC CGGCGCCAAC
GGTGACGATA CCACCACCAA CTTCAACTTC CGCCGCAACC GTCTCGCCTT TATGGGCAAG
TACGGCGATA TGCTGAGCCT TTATGTTCAG ACCGAATTCA CCGAAGATCC CAACGTGGGT
ACCCTCGGAG TCGGCGACAA CAGCGCCGAC ACGGAGTTCC AGCTTCTCGA CGCCGTTATG
CGTTTCAAAT TCCACGATGG GTTCCGGGTC AATGTGGGTA AATTCAAGCA CAACCTGACC
CGTGAGAATC TCGAAGCGTG CGAAATGCCT CTGACCCTGG ACCGGTCCCT CTTTATCCGC
GCCCCCTATG TTTCGACCCG CGACGTGGGT GTGGCGGTCT GGGGTAACCT GTTCAACGAC
GTCTTCCAGT ATCGCCTCGA CGCGATGGAA GGCCGCAAGG CCGGCGACCG GGATGCCAAC
GGCTATTCTT CGCCTGATTC GAACTTCCGC TATACGGCCC GCGCTCACGT GACACTGCTC
GATCCCGAGA AGGATTACGG CTACAAGGGT ACCTACATGG GCGAGAAGCA GGTCCTGACC
GTGGGCGCCG GGGTTCAGTA CGAGCCGAAC GTCGCTTATG GCAATGCCGC CACTCAGTCC
GACTCCAAGG ATTACACCGC CTGGACTGTT GACGGTTATT TCGAGTATCC GGTCGAAGGC
TTCGGCACCA TCACCGCTTC TGCCGCCTAC GCCGACTTCA GCATGGATGA CGCATATACC
GTATCCACCA ATGTGGACAG CGGTGCCATT GGCCTCAACG GCGAGAAAAA CGGCTGGTAT
GCCAAGGCCG GTTACATGCT CCCCAACTTC CCGCTCCAGA TCTTCGGCCG CTACGAGCGG
TGGAGCTTCG CCAGCCTCAA CAATGTGGTG GACCAGGACA TCAACTGGTA CGGCGTCGGC
GCCAACTACT ACATCTGGGG CCAGAACCTG AAACTGACGG CCGAGATCAG CAAGACCGAC
TTCGACAAGG AAGGCACGTA CAACGGAGTC AAGAGCGAGG ACTTCACCAC GTTCATCACC
CAGCTCCAGC TCCTTTTCTA G
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| Protein sequence | MMNMRKISTI SGVALGTALL AGTAFAGPRI TFGPEDQGAL QIDYKGQFQM SIRDNGSGAN
GDDTTTNFNF RRNRLAFMGK YGDMLSLYVQ TEFTEDPNVG TLGVGDNSAD TEFQLLDAVM
RFKFHDGFRV NVGKFKHNLT RENLEACEMP LTLDRSLFIR APYVSTRDVG VAVWGNLFND
VFQYRLDAME GRKAGDRDAN GYSSPDSNFR YTARAHVTLL DPEKDYGYKG TYMGEKQVLT
VGAGVQYEPN VAYGNAATQS DSKDYTAWTV DGYFEYPVEG FGTITASAAY ADFSMDDAYT
VSTNVDSGAI GLNGEKNGWY AKAGYMLPNF PLQIFGRYER WSFASLNNVV DQDINWYGVG
ANYYIWGQNL KLTAEISKTD FDKEGTYNGV KSEDFTTFIT QLQLLF
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