Gene GSU2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU2878 
Symbol 
ID2688664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand- 
Start bp3153358 
End bp3154461 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content64% 
IMG OID637127571 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionNP_953920 
Protein GI39997969 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0701839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCG GAATCGTCGG TTGGCGCGGT ATGGTCGGTT CGGTCCTCCT CCAGCGGATG 
GTGGAGGAAG GTGATTTTGG CATCGGCATC GAGCCGGTCT TCTTCTCCAC CTCCCAGGCG 
GGCCAGCCCG CCCCCATGAA CGCGGGAACG CTCAAGAGCG CCGATGACAT CGCAGAGCTG 
AAGAAGCTCG ACATCATCAT CACCTGCCAG GGGGGCGACT ACACCAAGGC GGTTCATCCT 
GAACTCCGCA AGCAGGGATG GCAGGGTTAC TGGATCGATG CGGCCTCAAC CCTCCGGATG 
GAGCCCGATG CGGTCATCAT CCTCGACCCG ATCAACCGCA ACGTCATCGA CGCGGCCCTG 
GCCAAGGGGC AGAAGGACTT CATCGGCGGC AACTGCACCG TCAGCCTCAT GCTCATGGGA 
CTGGGCGGTC TGTTCCGCGC CGGTCTGGTG GAGTGGATGT CGTCCATGAC CTATCAGGCC 
GCTTCCGGCG CCGGCGCTCC CAATATGCGC GAGCTCCTCT CCCAGATGGG TGTGCTACAG 
GGAGTAGTTG CCGAGGAGCT GAAGAATCCG GGGTCGGCGA TCCTGGAGAT CGACAAGAAG 
GTGACCGCTA CCCTGCGCGA CGGGTCCATG CCGATGAAGG AATTCGGCGG CTTCCCGTTG 
GCCGGCAACG TGCTCCCCTG GATCGACCGC GAGGTTGAGG ACGGCCAGAG CCGCGAAGAG 
TGGAAAGGGT TTGCCGAGAC CAACAAGATC CTCGGTACCT CCACCCCGAT CCCGGTCGAT 
GGCATCTGCG TCCGCGTCGG CGCCATGCGC TGCCACAGTC AGGCGATCAC CATCAAGCTG 
AACAAGGACC TGCCGCTGGC CGACATCGAG CAGATCATCG CCAACGACAA TGCGTGGGCA 
AAGCTGGTCC CCAACACCAA GGCCGATACC CTTGCCCAGC TCACGCCGGC AGCGGTTTCC 
GGGCTCCTCA CGGTTCCCGT GGGCCGCGTG CGTAAGATGA AGATGGGGCC CCAGTTCGTG 
CAGGCCTTCA CCTGCGGCGA CCAGCTCCTC TGGGGTGCCG CAGAGCCCCT GCGCCGGATG 
CTCCGCATCC TGGTGGAAAA GTAG
 
Protein sequence
MKVGIVGWRG MVGSVLLQRM VEEGDFGIGI EPVFFSTSQA GQPAPMNAGT LKSADDIAEL 
KKLDIIITCQ GGDYTKAVHP ELRKQGWQGY WIDAASTLRM EPDAVIILDP INRNVIDAAL 
AKGQKDFIGG NCTVSLMLMG LGGLFRAGLV EWMSSMTYQA ASGAGAPNMR ELLSQMGVLQ 
GVVAEELKNP GSAILEIDKK VTATLRDGSM PMKEFGGFPL AGNVLPWIDR EVEDGQSREE 
WKGFAETNKI LGTSTPIPVD GICVRVGAMR CHSQAITIKL NKDLPLADIE QIIANDNAWA 
KLVPNTKADT LAQLTPAAVS GLLTVPVGRV RKMKMGPQFV QAFTCGDQLL WGAAEPLRRM 
LRILVEK