| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2863 |
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| Symbol | rpoB |
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| ID | 2686783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 3138159 |
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| End bp | 3142271 |
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| Gene Length | 4113 bp |
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| Protein Length | 1370 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637127551 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | NP_953905 |
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| Protein GI | 39997954 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTATT CAATTGCGAA TAACCAGCTT CTGCGCAAGA ATTTCGCCAA GATCAAGAAG
ATCATCGACA TCCCCAATCT GATTGACATC CAGAAGAATT CCTACAAACG ATTCCTCCAG
ATCGACACTC CCCCCGAGGC CCGCAAGAAC AGTGGGCTTG AGGCGGTTTT TAAAAGCGTC
TTTCCCATAA AGGATTTCAG CGATACTGCC TCGCTTGAGT ACGTTACCTA TACTCTTGGC
GCTCCCAAGT ATGATGTTGA GGAGTGCCAC CAGCGCGGGA TGACCTTCGC CGCTCCCATG
AAGGTGAAGG TTCGGCTCGT GGTCTGGGAC GTGAATAAGG ATACCGGCGT CCGTTCCATC
CGCGATATCA AGGAGCAGGA GGTCTACTTC GGCGAGATCC CGCTCATGAC CGAGAACGGT
ACGTTCATCA TAAATGGTAC GGAGAGGGTT ATCGTCAGCC AGCTCCACCG CTCACCGGGC
GTTTTCTACG ACCATGACAA AGGCAAGACC CACTCCAGTG GCAAGGTGCT TTATTCGGCA
CGGGTAATTC CCTACCGCGG CTCCTGGCTC GATTTCGAGT TCGACCACAA AGATATCCTC
TTCGTGCGGA TCGACCGCCG CCGCAAGATG CCGGCGACCG TGCTGCTCAA GGCACTTGGC
TATTCCGCCG AAGCTCTGCT GAACTACTTT TATAAGAGCG AAGAGATCCT CGTCGCCGCC
GAGGGCATGT GGAAGAAAGC CGATCCGGAG CTGCTCGCGA GCCAGAAGGC ATCTGTCGAC
ATCGTTGCGC CTAAGACGGG CGAAGTGCTG CTCAAGGCCA ACCGCAAGTT CACCAAGGCA
GCAATCCGCA AGATGACTGA GCACGGCATC ACGCAGATTC CGATTACCAT GGAGGAAGTG
CTCGGCAAGT ATGCCTCCAA CGATATCGTT GACCCGTCCA CCGGGGAAGT CATCGTAGAG
TGCAACGACG AGATCACCCA GGCGCGCCTC GATGACATCA AGGCTAAGGG GATCACTGAG
TTCAAGGTGC TCTTCATCGA CAACCTCCAT GTGACTTCAT CGCTTCGCGA TACGCTCATC
GCCGACAAGA TTGCGGCAAC GGAAGAGGCT CTCATCGAGA TTTACCGCCG CCTGCGCCCC
GGCGATCCGC CGACCCTCAA GAGCGCACAG GCCCTCTTCG AGAACCTGTT TTTCAATGCC
GAGCGGTATG ACCTTTCTGC CGTTGGTCGT CTCAAGCTGA ATTTCAAGCT TGGGCTGAAC
GTTCCCCTCG ACTGCCAGAC GCTGACGAAA GACGACGTGC TCGAGGTGGT GCGCTACCTG
ATCGACCTCA AGAACGGCAA GGGCACCATC GATGACATCG ATCACCTGGG TAACCGCCGC
GTGCGCGCCG TGGGCGAGCT GCTGGAGAAC CAGTACCGGA TCGGCCTCGT CCGTATGGAG
CGGGCCATTA AAGAGCGGAT GAGTCTCCAG GAGGTCGAGA ACCTCATGCC GCACGACCTG
ATCAACTCCA AGCCCGTCTC AGCGGTCGTC AAGGAGTTCT TCGGTTCGTC CCAGCTCTCG
CAGTTCATGG ACCAGACGAA CCCCCTCTCC GAGGTTACCC ACAAGCGACG GCTCTCGGCC
CTCGGACCGG GCGGTCTGAC TCGCGAACGT GCTGGCTTCG AGGTCCGCGA CGTACACCCG
ACCCACTACG GCCGGGTCTG CCCCATCGAG ACTCCTGAAG GTCCGAACAT CGGTCTCATC
GCGTCCCTCT CCACTTACGC GCGCATCAAT GAGCACGGCT TTGTGGAGAC CCCTTACCGC
ATCGTCCAGG ACGGCAAGGT AACAAGCGAC GTCAAGTTTT TCTCGGCTCT GGAGGAAGAG
GGGCATGCAA TCGCCCAGGC CAACGCCGAG ATGGACGCAG ACGGCCGCTT CGTTAACGAA
TACGTATCGG CCCGCAAGTC GGGCGAGTTT CTGCTGGTCC ACCGGGACGA ACTCGAACTC
ATGGACGTTG CTCCCATGCA GCTCGTCTCC GTGGCCGCAT CGCTCATCCC GTTCCTGGAG
AATGATGACG CCAACCGCGC ACTCATGGGG TCGAACATGC AGCGCCAGGC CGTGCCGCTC
CTCAAGGCCG ATTCGCCCCT CGTGGGCACT GGTATGGAGC GCGTCGTTGC CAAGGATTCC
GGGGTGTCAG TGGTGGCGCG CCATACCGGC ATCGTCGAGT CGGTCGATGC CTCTCGCATC
GTTGTCAAGA TCGACGAGGA CGAGTTCGAT GAAACCGGCA CCGGTGTCGA CATCTACAAT
CTGATCAAGT TCGCCCGTTC AAACCAGAAC ACCTGCATCA ACCAGCGGCC GGTGGTCAAG
GTGGGCGACC ATGTCAAGCG GGGCGACGTC ATTGCCGACG GTCCCTCCAC CGACATGGGC
GAACTCGCCC TTGGGCAGAA TGTGGTTGTT GCCTTCATGC CGTGGGGCGG GTACAACTTC
GAGGACTCCA TCCTCGTGTC CGAAAAGCTC GTGAAGGACG ACCGCTACAC CTCGATCCAC
ATTGAGGAGT TCGAGTGCGT TGCTCGCGAC ACCAAACTCG GCAAGGAGGA AATCACCTCC
GATATCCCGA ACCTCGGCGA AGAGGCCCTA AAGGACCTGG ACGAGTCGGG GATCATCCGG
ATCGGTGCGG AGGTGAAGCC GGGAGACATC CTCGTGGGCA AGATAACCCC CAAGGGCGAA
ACCCAGCTTT CGCCGGAGGA AAAGCTCCTC CGTGCCATCT TCGGCGAGAA GGCGGGAGAT
GTCCGCGATA CCTCCCTGCG CGTCCCGCCG GGGGTCGAGG GAACCGTCAT CGGGGCCAAA
ATCTTCTCGC GCAAGGGGGC TGATAAGGAC TCCCGTACCG AGATGATCGA GCGGATGGAA
GAGGACAAAC TGCGCAAGGA TGAGCAGGAC GAGATCCGCA TCATCCGCAA TTCCGCCGTG
GGCAAGCTCA AGAAGCTCCT CGTCGGCAAG TCCGCTGCGG TCAAGGTGGA GGACAAGAGC
GGCCGGACCG TCATCGCCAA GGGTGCCGCC ATTACCGAAG AGGCCCTTGA CGCGATCCCG
CTCGATCGTT GGGACGAGAT TTCCGTGTCC GGCGAGGCGG GGGTCGATGA GAAAGTGTCG
GCGATTCTCC AGACACTCCA GCAGCAGATC GATATAATCC GTTACGTGTT CGATGACAAG
GTCCAGAAGC TGAAGCGTGG CGACGACCTG CCGCCGGGCG TCATCAAGAT GGTGAAGGTC
TACATCGCCA TCAAGAGAAA GCTCCAGGTG GGGGACAAGA TGGCCGGGCG CCACGGTAAC
AAGGGTGTCG TCTCCCGTAT CCTCCCCGAA GAAGACATGC CATACATGGA GGACGGTCGT
CCGGTCGAGA TCGTTCTGAA CCCCCTCGGT GTTCCGTCCC GTATGAACGT GGGCCAGATT
CTCGAAACCC ACTTGGGATG GGCAGCCAAG GGCATCGGCT GGAAGATCGA AGAGATGCTT
GAAAGCTACT CGCCGGCCGA CCACATCAAG GGCTACCTCA AGGATGTGTA TGGCACCACA
GAGATGGACA CATTCCTTGA CTCTCTCGAC AAAGACGAGC TCATGAACGT TGCAAAGCGG
CTCCAGCGGG GCGTTGCTAT GGCATCCCCC GTCTTCGAGG GGGCCTCGGA GGAGCAGATC
CGGAGCATGC TCGATAAAGC CGGATTTGAT GAAACCGCGC AGGTTTCCCT CTATGACGGC
AAGAGCGGTG AGCCCTTCAA GCATAAGGTC ACCGTCGGGG TCATGTATGT CCTCAAACTT
CATCACTTGG TCGACGATAA GATCCATGCC CGCTCCATTG GACCCTACAG CCTTGTGACC
CAGCAGCCGC TCGGCGGCAA GGCTCAGTTC GGCGGCCAGC GCCTCGGGGA GATGGAAGTC
TGGGCCATGG AAGCCTACGG TGCCGCCTAT GCGCTTCAGG AATTCCTGAC CGTCAAGTCC
GACGACGTGG CGGGCCGGAC GCGGATGTAC GAGGCCATCG TCAAAGGCAA GCACACCCTT
GAGCCGGGGC TTCCAGAATC CTTCAACGTT CTTATCAAGG AACTCCAGTC CCTCTGCCTC
GATGTGGAAC TGCTCGAAGG GGATGAAGAC TAG
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| Protein sequence | MAYSIANNQL LRKNFAKIKK IIDIPNLIDI QKNSYKRFLQ IDTPPEARKN SGLEAVFKSV
FPIKDFSDTA SLEYVTYTLG APKYDVEECH QRGMTFAAPM KVKVRLVVWD VNKDTGVRSI
RDIKEQEVYF GEIPLMTENG TFIINGTERV IVSQLHRSPG VFYDHDKGKT HSSGKVLYSA
RVIPYRGSWL DFEFDHKDIL FVRIDRRRKM PATVLLKALG YSAEALLNYF YKSEEILVAA
EGMWKKADPE LLASQKASVD IVAPKTGEVL LKANRKFTKA AIRKMTEHGI TQIPITMEEV
LGKYASNDIV DPSTGEVIVE CNDEITQARL DDIKAKGITE FKVLFIDNLH VTSSLRDTLI
ADKIAATEEA LIEIYRRLRP GDPPTLKSAQ ALFENLFFNA ERYDLSAVGR LKLNFKLGLN
VPLDCQTLTK DDVLEVVRYL IDLKNGKGTI DDIDHLGNRR VRAVGELLEN QYRIGLVRME
RAIKERMSLQ EVENLMPHDL INSKPVSAVV KEFFGSSQLS QFMDQTNPLS EVTHKRRLSA
LGPGGLTRER AGFEVRDVHP THYGRVCPIE TPEGPNIGLI ASLSTYARIN EHGFVETPYR
IVQDGKVTSD VKFFSALEEE GHAIAQANAE MDADGRFVNE YVSARKSGEF LLVHRDELEL
MDVAPMQLVS VAASLIPFLE NDDANRALMG SNMQRQAVPL LKADSPLVGT GMERVVAKDS
GVSVVARHTG IVESVDASRI VVKIDEDEFD ETGTGVDIYN LIKFARSNQN TCINQRPVVK
VGDHVKRGDV IADGPSTDMG ELALGQNVVV AFMPWGGYNF EDSILVSEKL VKDDRYTSIH
IEEFECVARD TKLGKEEITS DIPNLGEEAL KDLDESGIIR IGAEVKPGDI LVGKITPKGE
TQLSPEEKLL RAIFGEKAGD VRDTSLRVPP GVEGTVIGAK IFSRKGADKD SRTEMIERME
EDKLRKDEQD EIRIIRNSAV GKLKKLLVGK SAAVKVEDKS GRTVIAKGAA ITEEALDAIP
LDRWDEISVS GEAGVDEKVS AILQTLQQQI DIIRYVFDDK VQKLKRGDDL PPGVIKMVKV
YIAIKRKLQV GDKMAGRHGN KGVVSRILPE EDMPYMEDGR PVEIVLNPLG VPSRMNVGQI
LETHLGWAAK GIGWKIEEML ESYSPADHIK GYLKDVYGTT EMDTFLDSLD KDELMNVAKR
LQRGVAMASP VFEGASEEQI RSMLDKAGFD ETAQVSLYDG KSGEPFKHKV TVGVMYVLKL
HHLVDDKIHA RSIGPYSLVT QQPLGGKAQF GGQRLGEMEV WAMEAYGAAY ALQEFLTVKS
DDVAGRTRMY EAIVKGKHTL EPGLPESFNV LIKELQSLCL DVELLEGDED
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