Gene GSU2858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU2858 
SymbolrpsJ 
ID2688708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp3129218 
End bp3129526 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content53% 
IMG OID637127547 
Product30S ribosomal protein S10 
Protein accessionNP_953901 
Protein GI39997950 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.800784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAGTC AAAAGATTAG AATCCGCCTT AAGGCATTTG ATCATAAACT CCTCGACCAA 
TCGGTCGGAG AGATTGTTGA CACGGCGAAG CGCACCGGCG CCCGTGTGGC GGGTCCGATT
CCGCTTCCCA CCGTAATCAA CAAGTACTGC GTACTTCGTG GACCGCACGT GGACAAGAAA
TCTCGCGAGC AGTTCGAGAT TAGGACCCAC AAGCGTCTCA TCGACATTCT CGACCCGACC
CAGCAAACGG TTGATGCGCT TATGAAGCTC GACCTTTCGG CCGGTGTGGA TGTTGAAATC
AAGCTCTAG
 
Protein sequence
MPSQKIRIRL KAFDHKLLDQ SVGEIVDTAK RTGARVAGPI PLPTVINKYC VLRGPHVDKK 
SREQFEIRTH KRLIDILDPT QQTVDALMKL DLSAGVDVEI KL