Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2845 |
Symbol | rplE |
ID | 2686813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 3123285 |
End bp | 3123824 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637127534 |
Product | 50S ribosomal protein L5 |
Protein accession | NP_953888 |
Protein GI | 39997937 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.136132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGGC TTAAAGAGCT TTATCATAAA GAGATCGTCG AACAGCTGAC AAAAGACTTC GGTTATTCGA ACGTCATGCA GGTACCGAAG ATCGAAAAAA TCGTCGTCAA TATGGGGCTT GGTGAAGCGA TCCAGAATGT CAAGATCCTT GACTCGGCTG TCGAGGAGCT TGCCGCAATA GCGGGACAAA AGGCCGTCAT CACCAAGGCA AAGAAGTCGA TCGCTGGCTT CAAACTTCGC CAGGGGATGC CGATCGGCTG CATGGTCACC CTGCGCCGCG AAAAGATGTA TGAGTTCCTT GATCGACTCA TCAACGTGGC GCTCCCTCGC GTTCGCGACT TCAAAGGCGT TTCTGCCAAA GGGTTCGACG GACGGGGCAA CTACTCGCTT GGTGTTAAAG AGCAGCTTAT TTTTCCTGAG ATCAACTACG ACAAAATCGA CAAGATCAAG GGTCTGAACA TAACCATTGT AACGTCGGCA AAGACTGATG AGGAGAGCAG GGCTCTTCTC AAGCATCTCG GCATGCCGTT CAGGCACTAA
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Protein sequence | MARLKELYHK EIVEQLTKDF GYSNVMQVPK IEKIVVNMGL GEAIQNVKIL DSAVEELAAI AGQKAVITKA KKSIAGFKLR QGMPIGCMVT LRREKMYEFL DRLINVALPR VRDFKGVSAK GFDGRGNYSL GVKEQLIFPE INYDKIDKIK GLNITIVTSA KTDEESRALL KHLGMPFRH
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