Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2837 |
Symbol | secY |
ID | 2688725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 3119208 |
End bp | 3120515 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637127526 |
Product | preprotein translocase subunit SecY |
Protein accession | NP_953880 |
Protein GI | 39997929 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATCGATG CATTCCAGAA CATCTTCCGA ATACCTGAAC TGAAGAAACG AGTGCTTTTT TCGCTGGGAA TGCTGGCAGT TTACCGGGTC GGTTGTCATA TCCCGACCCC AGGCATCGAC AGCAACGCAC TTGCGCACTT CTTCGCTCAA GCCCGTGGTA CACTCCTCGG GCTTTTCGAC ATGTTTTCGG GGGGCGCGCT GGAGAAGCTG ACCGTCTTCG CTCTGGGCAT CATGCCCTAT ATTTCATCGT CCATCATTTT CCAGTTGTTG ACGGTGGTTG TGCCTTCCAT TGAGAAATTG TCCAAGGAAG GGGAGTCCGG CAGGAAAAAG ATCATACAGT ACACACGCTA CGGTACGATA GTGCTCAGCG TGGTTCAGGC ACTCGGTATC AGCATTGGCC TTGAGAGCAT GCGCGGACCG GCAGGTGAAC TTGTCGTTCC TAATCCCGGA TGGGGCTTCA GGCTGATGAC AGTCATCACA TTGACCGCTG GGACGGCATT CATTATGTGG CTCGGTGAGC AGATGTCCGA GAAGGGGATC GGCAACGGAA TCTCTCTTAT CATCTTTGCT GGAATTGTCG CACGGATACC GACGGCCCTT CTCAATACTG GCCGCCTGAT CAAGACGGGG CAGCTGTCAC TGTTTGTGAT CCTGCTTGTT GTGGCACTGA TGTTTCTGGT AATTGCTGCA ATCGTGTACG TTGAGCGAGG GCAGCGACGG TTGCCGATTC ACTACGCGAA ACGGGTTGTC GGGCTGAAGA CATATGGTGG GCAGACCTCG CACTTACCAC TCAAGGTGAA TATGGCCGGT GTTATCCCGC CGATCTTTGC ATCGTCCATC ATCATGTTCC CGGCAACGGT CGCAAACTTT ATAAACGTAC CATGGGTCCA GACGGTTGCC AAAAGTCTGA CTCCCGGCAA CCTAGCCTAC GAAATCTTTT ATGTTGCCTT TATTATCTTC TTCTGTTATT TCTATACGGC TGTTTCGTTT AATCCCGTTG ATGTTGCGGA GAACGTTAAA AAGCACGGCG GATATATACC CGGGATTCGT CCGGGCAAGG AAACGTCCGA CTATCTTGAT CGGGTGCTGA CAAAGCTTAC CTTTGCCGGA GCCTTGTATA TCTCGGCTGT ATGCGTTCTC CCGTCTGTGC TTGTCGGCAA GTTCAATTTG CCGTTCTACT TCGGCGGCAC TGCTCTGCTC ATTGCTGTAG GGGTTGGCAT GGACACCGCG GCACAGATTG AATCCCATCT CATCACCCGA AGCTATGAGG GTTTTATGAA GGGTGTGCGG GTGCGGGGCG GGCGGTAA
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Protein sequence | MIDAFQNIFR IPELKKRVLF SLGMLAVYRV GCHIPTPGID SNALAHFFAQ ARGTLLGLFD MFSGGALEKL TVFALGIMPY ISSSIIFQLL TVVVPSIEKL SKEGESGRKK IIQYTRYGTI VLSVVQALGI SIGLESMRGP AGELVVPNPG WGFRLMTVIT LTAGTAFIMW LGEQMSEKGI GNGISLIIFA GIVARIPTAL LNTGRLIKTG QLSLFVILLV VALMFLVIAA IVYVERGQRR LPIHYAKRVV GLKTYGGQTS HLPLKVNMAG VIPPIFASSI IMFPATVANF INVPWVQTVA KSLTPGNLAY EIFYVAFIIF FCYFYTAVSF NPVDVAENVK KHGGYIPGIR PGKETSDYLD RVLTKLTFAG ALYISAVCVL PSVLVGKFNL PFYFGGTALL IAVGVGMDTA AQIESHLITR SYEGFMKGVR VRGGR
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