Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2832 |
Symbol | rpsD |
ID | 2686834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 3116173 |
End bp | 3116799 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637127521 |
Product | 30S ribosomal protein S4 |
Protein accession | NP_953875 |
Protein GI | 39997924 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.80203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTAGAT ATACAGGTCC TTCCTGCCGG CTGTGCAGAA GGGAGAACAT GGAGCTGTTT CTGAAGGGTG AGCGGTGCTA TACCGATAAG TGTGCCATTA AGCGGCGTAA TTATCCGCCG GGACAGCATG GGCAGGGACG GCCGAAGGTC TCCAACTACG GCGTTCAGCT GCGCGAAAAG CAAAAAGTGA GGAGGATCTA CGGCATCCTC GAGAAGCAAT TTCGGAGCTA TTTCCAAGAG GCGGATCGTC TCAAGGGAGT TACTGGTGAG AATCTGCTCT CGCTGCTTGA GCGCCGTCTG GACAATGTGG TGTACCGGCT TGGTTTTGCC GCTTCCCGCA CCGAGGCCAG AATCCTCGTT CGGCATAATC ACTTCACGCT GAACGGCAAG AAGGCGAATA TTCCTTCGAT CCAGCTCCGT GCTGGCGATG TCGTTGAACT CAAGGAAAAA AGCCGGAAGA TAGCGTGTAT CAATGAGTCT CTTGATGCGG TTGTGCGCAG GGGCATTCCC CAGTGGCTTG AGCTTGAGAA GGACGCTTAC AAAGGTGTCG TGAAAACTCT TCCCGTGCGT GAAGACATTA CGATGCCGAT CCAGGAGCAA CTGATCGTCG AGCTCTATTC GAAGTAA
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Protein sequence | MARYTGPSCR LCRRENMELF LKGERCYTDK CAIKRRNYPP GQHGQGRPKV SNYGVQLREK QKVRRIYGIL EKQFRSYFQE ADRLKGVTGE NLLSLLERRL DNVVYRLGFA ASRTEARILV RHNHFTLNGK KANIPSIQLR AGDVVELKEK SRKIACINES LDAVVRRGIP QWLELEKDAY KGVVKTLPVR EDITMPIQEQ LIVELYSK
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