| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2782 |
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| Symbol | |
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| ID | 2686984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 3060587 |
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| End bp | 3063697 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637127472 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | NP_953826 |
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| Protein GI | 39997875 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0804863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTA CCGACCTTTT TATCCGCCGC CCCGTGCTGG CCCTGGTGGT CAGCCTGATC
ATCGTCATCG CCGGCCTCCA GGCGATCCGC AGCCTGAACG TGCGCCAGTA CCCCCGCAGC
GAGAACGCGG CGGTGACCGT AACCACCGTG TACGTGGGGG CCAGCGCCGA CCTGGTGCGG
GGCTTCGTCA CCACGCCGCT GGAACGGGCC ATTGCCGCGG CAGACGGCAT CGAGTACATG
GAGTCCCAGA GTACCCTGGG GCTTTCCACC ATCAAGGTGC GCCTGAAGCT GAACTACGAC
GGCACCAAGG CCCTGGCCGA GATCAGCTCC AAGGTGGACC AGGTGCGCCG CGACCTGCCG
CCCGAGGCGG AGGTGCCGGT CATCAACATC GAGTCGGCCG ACAGCGAGTT CGCTTCGGCC
TACCTGAGCT TCTCCTCAGA CATCCTCCAG CAGAACGAGA TCACCGACTA CCTGGTGCGG
ATCGTCCAGC CGCGGCTTTC GGCGATCCAG GGGGTGCAGC GGGCCGACGT GCTGGGGGCC
CGCACCTTTG CCATGCGGAT CTGGCTGAAG CCCGACCGGA TGGCGGCCCT CAACGTGAGC
CCGGCCCAGG TGCGCGAGGC CCTGGCGGCC AACAACTTCC TGGCCGCCCT GGGGCGGACC
AAGGGGTCCC TGATCCAGGT GAACCTCACC GCCAACACCA ACCTGAACAC GGTGGAGGAG
TTCCGGCAGC TGGTGGTGCG GCGCCAGGAC GGCGCCCTGG TGCGGCTGTC CGACATCGCC
GACGTGTCGC TGGGGGCCGA GGACTATGAC GCCGAGGTCC GCTTCTCGGG CCAGACCGCC
GTGTTCATGG GGATCTGGCC CCTGCCCAAC GCCAACTCCC TCGACGTGAT CAAGCGGGTA
AGGACGGAGA TGGCGGCCAT CCAGAGGGAC CTCCCCTCGG GGCTTCAGGC CCGCGTGGCC
TACGACGCCA CCGATTACAT CGACAACGCC ATCCGGGAAG TGCTCAAGAC CCTGAGCGAG
ACCCTGCTCA TCGTCATCGT GGTGATTTTC CTCTTCCTGG GCTCCCTCCG CTCGTCCCTG
GTGCCGGTGG TGGCGATCCC GGTGTCGCTC ATCGGCGCCG TGTTCCTGAT GCAGGCCTTC
GGCTTCACCG TGAACCTGCT GACGCTCCTG GCCATCGTCC TGTCGGTGGG GCTCGTGGTG
GACGACGCCA TCGTGGTGGT GGAGAACGTG GAGCGGCACA TGCGGGAGGG GCAGTCGCCC
CTGGAAGCGG CGTTCCTCGG CGCCCGGGAG CTGGTGGGGC CCATCATCGC CATGACCATC
ACCCTGGCCG CCGTCTACCT CCCCATCGGC CTCCAAGGGG GGCTGACCGG CTCCCTGTTC
CGGGAGTTCG CCTTTACCCT GGCCGGGGCG GTGACCATTT CCGGAGTGGT TGCCCTGACC
CTGTCGCCGG TCATGTCGGC CAAGTTCCTG AAGCCGGGCG CCGGCGAGCA CGGCCTGGCC
GGACGGATCA GCCGCGACTT CAACCGGCTC AAGGATGCCT ACGGCCGCTG GCTCGACGCC
ACCCTGGCCG CCCGGCCGGC AGTCTATACG GTCTGGCTGG TGGTGAGTCT CCTGGCCATC
CCCATGTTCA CTATGTCGGC GCGGGAGCTG GCCCCCACCG AGGACCAGGG GGTCATCTTC
GGCATCCTGG ACGCCTCGGC CAACTCGACC CTGGACCAGA CGAGCCGCTA CGCCGCCGCG
GCCAACAAGG TGTTCATGGG CATCCCCGAG ACCGACTTCA CCTTCCAGAT CACCTTCCCC
AACTCGGGCT TCGGCGGCAT GGTCACCAAG CCGTGGGACG AGCGGGAGCG GACCGTGTTC
CAGATGATGC CCGAGGTTCA GCAAAAGCTG GCCGCCATCC CCGGCATCCA GATGTTCCCG
GTGACCCCGC CGGCCCTCCC CGGAGGCGGG CAATTCCCGG TGGAGTTCAT CCTGGCCTCC
ACCGCCGAGA CCGGCCAGAT CCTCGAGTTC GCCCAGAAGC TCCAGCTGAA GGCCATGCAG
AGCGGCATGT TCGCCTTTCC GCCCATCATC GACGTGAAGA TCGACCAGCC CGAGGCCCGG
TTCGAGATCG ACCGGGACAA GGTGGCCGCC CTGGGCCTCA ACCTGGAACA GGTGGGGGCC
GATCTGGGCG CCATGGTGGG GGGGAACTTC GTCAACCGTT TCGACATCGC CGGACGGAGC
TACAAGGTCA TCCCCCAGAT CGAGCGGGTG GGACGCCTCA ACCCCGAGCA GCTCTCGTCG
GTCTACATCA CCGGCCCCGA GGGTAAGCTC ATCCCCCTGT CCACCGTTGC CAGCCTGAAG
GAGACCGTGG TTCCCCGCTC CCTCAACCGG TTCCAGCAGC TGAACGCGGT CAAGCTGAGC
GGCGTGGCCG TGCGCCCCCT GGACGAGGCG CTTCGCTTCC TGGAAGGGGA GGCGGCAAAA
ATCCTGCCCC AGGGATACGT GCTCGACTAC ACCGGCGAGT CGCGCCAGCT CCGCACCGAG
GGGAACAAGT TCCTCCCGGC CTTCGCCCTG GCCATTGTCC TGATCTTCCT GGTGCTGGCG
GCCCAGTTCA ACAGCTTCCG GGACCCCTTC GTCATCCTGG CCGGCTCGGT CCCCCTGGCC
ATATTCGGGG CACTCATCTT CACCTTCCTG AAGATGCCAG ACCCCAACGT GGCCTTCTGG
ACCCACGGCT GGACCACCAC CCTCAACATC TACTCACAGG TGGGACTGGT GACCCTGGTG
GGGCTGGTGT CCAAGAACGG CATCCTGATC GTGGAGTTCG CCAACCAGCC CCAGCTCCAG
GGGCTGTCCA AGCACGACGC CGTACGCCAG GCAGCCATGA CCCGCCTCAG GCCGATCATG
ATGACCACCG CGGCCACCAT TGCCGGCCAC TTTCCCCTGA CCCTGGTCTC CGGCGCCGGC
GCTGCGGCCC GGAATTCCAT CGGCCTCGTG CTGGTGGGGG GGATGTTCGT GGGCACCCTC
TTCACCCTGT TCGTGGTCCC CTCCATCTAC ATGCTGGTGG CCCGCGACCA CAGCCGCGAC
CGGGAGCGCG AGGCGACGGT GGCGGCCGAA GGTGCGGCGA CCAATCCCTG A
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| Protein sequence | MNITDLFIRR PVLALVVSLI IVIAGLQAIR SLNVRQYPRS ENAAVTVTTV YVGASADLVR
GFVTTPLERA IAAADGIEYM ESQSTLGLST IKVRLKLNYD GTKALAEISS KVDQVRRDLP
PEAEVPVINI ESADSEFASA YLSFSSDILQ QNEITDYLVR IVQPRLSAIQ GVQRADVLGA
RTFAMRIWLK PDRMAALNVS PAQVREALAA NNFLAALGRT KGSLIQVNLT ANTNLNTVEE
FRQLVVRRQD GALVRLSDIA DVSLGAEDYD AEVRFSGQTA VFMGIWPLPN ANSLDVIKRV
RTEMAAIQRD LPSGLQARVA YDATDYIDNA IREVLKTLSE TLLIVIVVIF LFLGSLRSSL
VPVVAIPVSL IGAVFLMQAF GFTVNLLTLL AIVLSVGLVV DDAIVVVENV ERHMREGQSP
LEAAFLGARE LVGPIIAMTI TLAAVYLPIG LQGGLTGSLF REFAFTLAGA VTISGVVALT
LSPVMSAKFL KPGAGEHGLA GRISRDFNRL KDAYGRWLDA TLAARPAVYT VWLVVSLLAI
PMFTMSAREL APTEDQGVIF GILDASANST LDQTSRYAAA ANKVFMGIPE TDFTFQITFP
NSGFGGMVTK PWDERERTVF QMMPEVQQKL AAIPGIQMFP VTPPALPGGG QFPVEFILAS
TAETGQILEF AQKLQLKAMQ SGMFAFPPII DVKIDQPEAR FEIDRDKVAA LGLNLEQVGA
DLGAMVGGNF VNRFDIAGRS YKVIPQIERV GRLNPEQLSS VYITGPEGKL IPLSTVASLK
ETVVPRSLNR FQQLNAVKLS GVAVRPLDEA LRFLEGEAAK ILPQGYVLDY TGESRQLRTE
GNKFLPAFAL AIVLIFLVLA AQFNSFRDPF VILAGSVPLA IFGALIFTFL KMPDPNVAFW
THGWTTTLNI YSQVGLVTLV GLVSKNGILI VEFANQPQLQ GLSKHDAVRQ AAMTRLRPIM
MTTAATIAGH FPLTLVSGAG AAARNSIGLV LVGGMFVGTL FTLFVVPSIY MLVARDHSRD
REREATVAAE GAATNP
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