Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2758 |
Symbol | |
ID | 2685943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 3033064 |
End bp | 3038631 |
Gene Length | 5568 bp |
Protein Length | 1855 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637127448 |
Product | excinuclease ABC family protein |
Protein accession | NP_953802 |
Protein GI | 39997851 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCCACG AATCGATCTC CATCCGCAAT GCCCGCCAGA ACAACCTGAA GAATCTCGAT CTCGACCTTC CCCTGGGCGA GTTGATTGTC GTCACCGGCG TTTCCGGTTC GGGGAAGTCG TCGCTCGCCT TCGATACGGT CTACGCCGAG GGGCAGCGGC GCTACGTGGA GACCTTTTCC CCCTATGCCC GTCAGTTCCT GGAGCGGATG GATCGCCCGG CCGTGGACCG GATCGACGGC ATCCCCCCGG CCATCGCCAT CGACCAGACC AACCCGGTCC GCACCTCCCG CTCCACCGTG GGTACCATGA CGGAACTGAA CGACCACCTG AAGCTCCTGT TCGCCCGGGC CGCGCGGCTC TTCTGCCGCG GCTGCGGCCG GCCGGTACGG CGCGATACGC CCGAGAGCAT CGCGGATGAG CTGCTGGCGC GGGATGCCGG CGCCGGGGCC GCCGTGCTGG TTACCTTCCC GGTGCCGGTG CCGGCCAATT TTTCCACCGA CGAGGTGAAA GGGTTCCTGG CCGGCCAGGG ATACACCCGC ATCTACCGGG AGGAGGAAGG CATCCTGGAG GTGATCCAGG ACCGCACCCG CCTGGCACCG GCGAACCGTT CCCGCCTGGT GGAGGGGATG GAGGCGGCGC TGCGCGTCGG GCACGGGCGG GTGTTCGTCC GTCCCGCCGG CGAAGGTTCC GCGTCGGAAC CGTGGCGCTT TTCCAGCGAC CTCCACTGCC CGGACTGCGA CATCTCCTAC CAGGACCCGG CGCCCCACCT CTTCTCCTTC AACTCGCCGG TGGGGGCCTG CGCCACCTGC CGGGGGTTCG GCCGGGTGAT CGGCATAGAC CTTGGGTTGG TGATCCCGGA CGAATCCAGG TCCCTGGCGG ACGGGGCGGT GAAGCCGTGG CAGACCGAGA GCTACCGGGA ATGCCGGGAC GACATGATCT CCTTCGCCAC CAAGCGTGGC ATCCCTGTCA ACGTGCCCTG GCGGGAGCTG GCGCCGGAGC AGCGCCGGTG GGTGCTCGAG GGGGAGGGTT CCTGGGAGGA CGGGCTCTGG TACGGGGTGC GGCGCTTTTT CGACTGGCTC GAAACCAAGA GCTACAAGAT GCACATCCGG GTCCTCCTCT CCAAGTACCG GGCCTACACC CTCTGTCCCG CCTGCGGGGG GGCGCGGCTC TCCCCCGATG CGCTCCTGTG GCGGCTCGGG ACAACGGAGG AGGCCGACCG GGTCCTGCCG CCGGAAGAGC GGTTCCGCCC CCAGGGGATG GAGTTGCCCG ATGAGGTTCT ACGCCACCTC CCCGGCCTCA CCATCCACGA TGTCATGCTC CTGCCCCTGG AGCGCTGCTC GTCGTTTTTC GGCGGCTTGG CGCTGCCGGC CCCCCTGGAC GAGGCGGCGG ACCTGCTGCT GCGGGAGATC CGCGTCCGCC TGGGCTACCT GGGGGAGGTG GGGCTCGGCT ACCTCACCCT GGACCGCCAG TCGCGCACTC TCTCCGGGGG CGAGGTGCAG CGGATCAACC TGACCACGGC CCTGGGTACC TCCCTGGTGA ACACCCTGTT CGTCCTGGAC GAGCCCTCCA TCGGCCTCCA TCCCCGGGAC ATGGGGCGGG TGATCGGCGT GCTGCGGCAG TTGCGGGACG CGGGCAACAC CCTGCTGGTG GTGGAGCACG ACCCCCAGGT GATGCTCGCC GCCGACCGGT TGCTCGACCT TGGCCCCGGT CCGGGCGAGC GGGGCGGCGA GGTGGTCTTC TTCGGCCTGC CCGCGGCAAT TCTGAACGAG CAGCGCTCCC TGACCGGCGA GTATCTGGCG GGGCGGAAAC AGGTGGCCAC CGGCGACGGG CTCCGGCCGG TTAGGGAGGG GCATCATTCC CTGGAAATCC TCGGCGCCGC CGCCCACAAC CTCACGGGGG TCGACGTCCG CATTCCCCTG AACCGCCTGG TCTGCATCAC CGGCGTCTCC GGCTCGGGCA AGTCGACCCT GGTCCAGGAG GTGCTGCACC GGGGGCTCCT GAAGCTCAAG GGGAGGCCGA CGGAGCCGCC GGGGGCGCAC GCTGCCATCC GTGGTGCGGA GCTGATCGGC GATGTCGTTA TGGTGGACCA GTCCCCCATC GGCAAGACCA CCCGCTCCAA CCCCGCCAGC TACGTGGGGG CCTTCGACGC CATCCGCAAG CTCTTCGCGG CCGAGCCCCT GGCCAAGGAG CGGGGCTATA CCACCGGCAC GTTCAGCTTC AACGCCGGCA CCGGCCGCTG CCCTTCCTGC GGCGGCAACG GCTTCGAGCA TGTGGAGATG CAGTTCCTCT CCGACGTCTA CCTCCGTTGC CCCGACTGCG ACGGCAGCCG CTACCGCCCC GAGGTGCTGG AGGTGCGGCT CGTGCCGGGA GGGGGCGGGC GCCCCCTGTC CATCGCCGAC GTGCTGGAGA TGACCGTGAC CGAGGCGGTG GCTTTTTTCG CTGATCAGCG GGAGGTGCTC CGGCGCCTGG AACCGCTGGA GGCCGTGGGG CTCGGCTACC TCCGCCTGGG CCAGCCGGTG CCGACCCTTT CCGGCGGTGA GGCCCAGCGC CTGAAACTTG CCGGCCACCT GGCCGAAGTG GGGGGGCGGA GACGCACGGG GGCGGGGAAC CTTTTCCTGT TCGACGAGCC CACCACCGGC CTCCACTTCG AGGACATCGC CCGGCTCCTG GCCGCCTTTC GCCGGCTGCT GGAGGCCGGG GACTCCCTGG TGGTGATCGA GCACAACCTG GACGTGATCA GCGCCGCGGA CTGGCTGATC GACCTGGGGC CCGAGGGGGG CGACGCCGGG GGACGGGTGG TCTGCGTCGG GACACCGGAC CAGGTGATGA CGTGCCCGGA AAGCCATACC GGCCGAGCCC TGCAGGAGTA CGGGGAGGAA CTGGCCGCCC TGGTGCGGGC ATCGACTCAG CCGGCGGCGG AGGCGCTCCC CGCCGTGGTG CCGGACCGGT CCATCCGCAT CGTCCATGCC CGGGAGCACA ACCTGAAGAA TGTCACCATC GCCGTGCCCC GTGACCGCTT CACGGTCATC ACCGGCATCT CGGGGAGCGG CAAGTCCACC GTGGCCTTCG ACATCCTCTT TGCCGAGGGG CAGCGGCGCT ACCTGGAATC CCTCAACGCC TACGCCCGCC AGTTCGTCCA GCCCGCTGCC CGTCCCGACG TGGACGCGGT CCTCGGCATC CCGCCCACGG TGGCCATCGA GCAGCGGACG AGCCGGGGCG GGCGCAAGAG CACCGTGGCG ACCATGACGG AGATCTACCA CTTCCTCCGC CTCCTCTTTG TGAAGCTCGG GGTCCAGCAC TGCCCCGACT GCGGCATCCC CATCACCCCC CAGACCCCGG ACGCCATCGC AGCCCGGCTT CTGCGGGAGC TCCGGGGGAA GCGGGTGGCG CTCCTGGCAC CGCTGATCAC GGCCCGGAAA GGGTACTACA CCGACCTGGC CGCGTGGGCC GCGGGCAAGG GCTTCACGCA CCTGCGGGTG GATGGCGTCA TGACCCCGGT GGAGCCCTGG CCACGCCTCG ACCGCTTCCG GGAGCACGAC ATCGACCTGC CGGTGGGGGA GATTGCCGTG TCGGCCAAAG GGGAGGGGGA ACTGCGGCAG CTTCTCGACC GGGCCCTGGT CTTCGGCAAG GGGGTGGTGC GGGTGGCGGT GACGCACGCC GACGCCGGCA GCCAATCGAA AGCGGAGTTG CTCTTTTCGA CGCTCAGGGC CTGCACCTCC TGCGGCCAGA GCTTCCCCGA GCCCGACCCG CGGCTCTTTT CCTACAACTC CCGCCACGGC TGGTGCCCCC GTTGTTTCGG CACGGGGCTG GAGATCCCCG GCTTCGACGC GGAGCAGACC GGCGAGGAGA TCTGGTGGAA CGAGTGGTTC GAGGGGGAGG AGCAGACCTG CTCCGCCTGC CGCGGCGCCC GGCTCAACCC CGAGGCCCTG GCGGTCCGTT TCCGGGACCG GAATATTGCC GAGCTGACGG CCCTCACCGT GATCCAGGCT GCCGCCTTTA TCGCCGAACT GGGTCTTGAG GGGCGGGAGG CGGCCATCGC CCGCGATATC GTGGCCGAGA TCACGACGCG GCTCGCCTTC CTGGGCGAGG TGGGGCTCGG GTACCTGTCC CTCGACCGGG CGGCCCCGAC CCTCTCCGGC GGCGAGGCCC AGCGGATCAG ACTGGCGGCC CAGCTGGGCT CGAACCTGCG GGGGGTCTGC TACATCCTGG ACGAGCCCAC CATCGGCCTC CACCCCCGGG ACAACCGGAT GCTGCTGGAC ACCCTGCGGA AACTGGAGGG GAAGGGGAAC ACCATCGTGG TGGTGGAGCA CGACGAGGAG ACCATCCGCC GGGCCGAGCA CGTCATCGAC CTGGGCCCCG GCGCCGGGGT CAACGGCGGC CTGGTGGTGG CCGAGGGAAC CCTGGAGCAG GTCATGGCGG CCCTGGACTC CCTCACGGGG CGCTACCTGG CCGAGCCCCT GCGCCATCCC CTGGTGGAGC GGCGACCTGC GCCGCCGCCG GATGCGCCGG CCATCCAGGT GTTGGGGGCC ACCCTCCACA ACCTGCGGGA GATCGACGTG TCCTTCCCGC TCCGGCGTCT GGTCTGCGTG ACCGGCGTCT CGGGGAGCGG CAAGAGCACC TTGGTGCGCA ACGTTCTCCA CGCCGGGCTC CAGGGGCTTC TGGCCCACGG CAGGGGGGCC CATGCCGTGG CCGGGTGCCG GGAGATCCGG GGCTGGGACC AACTCACCCG CGTGCTGGAG GTGGACCAGA CCCCCATCGG CAAGACGCCC CGTTCCTGTC CCGCCACCTA CGTGGGATTC TGGGACGCCA TCCGGAAACT CTACGCCGGC ACTACCGAGG CGCGGCTGCG GGGGTACGGC CCCTCCCGCT TCTCCTTCAA CGTGAAGGGG GGGCGGTGCG ACGAGTGCGA GGGGCAGGGG GTGAAGACCA TCGAGATGAG CTTCCTCCCC GACGTGAAGG TGGCGTGCGA GGTGTGCGGC GGCCTCCGCT TCACCCCTGA AACCCTTATG GTCCGCCATC GGGGGAAATC CATCGGCGAC CTCCTGGCCA TGAGCGTGGA CGAGGCAGTG GAGTTCTTCG CGGCCCACCG GTCGATCCTT CACCCGCTCC AGCTTCTGCA GGACGTGGGG CTCGGCTACC TGACCCTGGG CCAGCAGAGC CCGACCCTTT CCGGCGGCGA GGCCCAGCGG ATCAAGCTCG TTACCGAGCT GGCCAAGGCA AAGCCGGTGA AGGATGCGCT CCGGGTGCCT CGCACCGCCT CCCACTCCCT CTACATCCTG GACGAACCCA CCATCGGCCT CCACATGGCT GATGTGGAGA AGCTGGTACG AGTCCTGCAC CGGCTGGTGG AGGCGGGGAA CTCGGTCATC GTCATCGAGC ACAACCTGGA CGTGATCGCC GAGGCCGACT GGCTCATGGA CCTGGGGCCC GAGGGGGGTG ACGGCGGCGG GCGCATCGTG GCCCGGGGGA CGCCGGAAGA GGTGGCCCGG ATGGGGGATG TGTCCCACAC GGGGAGGATT CTCGGGGAGT TTTTGCGGGA GCGGCGGCGC GCCGGTCCGT CAGCGTAG
|
Protein sequence | MAHESISIRN ARQNNLKNLD LDLPLGELIV VTGVSGSGKS SLAFDTVYAE GQRRYVETFS PYARQFLERM DRPAVDRIDG IPPAIAIDQT NPVRTSRSTV GTMTELNDHL KLLFARAARL FCRGCGRPVR RDTPESIADE LLARDAGAGA AVLVTFPVPV PANFSTDEVK GFLAGQGYTR IYREEEGILE VIQDRTRLAP ANRSRLVEGM EAALRVGHGR VFVRPAGEGS ASEPWRFSSD LHCPDCDISY QDPAPHLFSF NSPVGACATC RGFGRVIGID LGLVIPDESR SLADGAVKPW QTESYRECRD DMISFATKRG IPVNVPWREL APEQRRWVLE GEGSWEDGLW YGVRRFFDWL ETKSYKMHIR VLLSKYRAYT LCPACGGARL SPDALLWRLG TTEEADRVLP PEERFRPQGM ELPDEVLRHL PGLTIHDVML LPLERCSSFF GGLALPAPLD EAADLLLREI RVRLGYLGEV GLGYLTLDRQ SRTLSGGEVQ RINLTTALGT SLVNTLFVLD EPSIGLHPRD MGRVIGVLRQ LRDAGNTLLV VEHDPQVMLA ADRLLDLGPG PGERGGEVVF FGLPAAILNE QRSLTGEYLA GRKQVATGDG LRPVREGHHS LEILGAAAHN LTGVDVRIPL NRLVCITGVS GSGKSTLVQE VLHRGLLKLK GRPTEPPGAH AAIRGAELIG DVVMVDQSPI GKTTRSNPAS YVGAFDAIRK LFAAEPLAKE RGYTTGTFSF NAGTGRCPSC GGNGFEHVEM QFLSDVYLRC PDCDGSRYRP EVLEVRLVPG GGGRPLSIAD VLEMTVTEAV AFFADQREVL RRLEPLEAVG LGYLRLGQPV PTLSGGEAQR LKLAGHLAEV GGRRRTGAGN LFLFDEPTTG LHFEDIARLL AAFRRLLEAG DSLVVIEHNL DVISAADWLI DLGPEGGDAG GRVVCVGTPD QVMTCPESHT GRALQEYGEE LAALVRASTQ PAAEALPAVV PDRSIRIVHA REHNLKNVTI AVPRDRFTVI TGISGSGKST VAFDILFAEG QRRYLESLNA YARQFVQPAA RPDVDAVLGI PPTVAIEQRT SRGGRKSTVA TMTEIYHFLR LLFVKLGVQH CPDCGIPITP QTPDAIAARL LRELRGKRVA LLAPLITARK GYYTDLAAWA AGKGFTHLRV DGVMTPVEPW PRLDRFREHD IDLPVGEIAV SAKGEGELRQ LLDRALVFGK GVVRVAVTHA DAGSQSKAEL LFSTLRACTS CGQSFPEPDP RLFSYNSRHG WCPRCFGTGL EIPGFDAEQT GEEIWWNEWF EGEEQTCSAC RGARLNPEAL AVRFRDRNIA ELTALTVIQA AAFIAELGLE GREAAIARDI VAEITTRLAF LGEVGLGYLS LDRAAPTLSG GEAQRIRLAA QLGSNLRGVC YILDEPTIGL HPRDNRMLLD TLRKLEGKGN TIVVVEHDEE TIRRAEHVID LGPGAGVNGG LVVAEGTLEQ VMAALDSLTG RYLAEPLRHP LVERRPAPPP DAPAIQVLGA TLHNLREIDV SFPLRRLVCV TGVSGSGKST LVRNVLHAGL QGLLAHGRGA HAVAGCREIR GWDQLTRVLE VDQTPIGKTP RSCPATYVGF WDAIRKLYAG TTEARLRGYG PSRFSFNVKG GRCDECEGQG VKTIEMSFLP DVKVACEVCG GLRFTPETLM VRHRGKSIGD LLAMSVDEAV EFFAAHRSIL HPLQLLQDVG LGYLTLGQQS PTLSGGEAQR IKLVTELAKA KPVKDALRVP RTASHSLYIL DEPTIGLHMA DVEKLVRVLH RLVEAGNSVI VIEHNLDVIA EADWLMDLGP EGGDGGGRIV ARGTPEEVAR MGDVSHTGRI LGEFLRERRR AGPSA
|
| |