Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2744 |
Symbol | |
ID | 2685993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 3019720 |
End bp | 3020901 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637127435 |
Product | major facilitator family transporter |
Protein accession | NP_953789 |
Protein GI | 39997838 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTCAG GCATCTCCGG CAACGTGCTC ATCCTGGGGG TGGTCAGCTT CCTGACCGAT GTCTCCAGTG AGATGATCTA TCCGCTACTC CCCCTCTTCC TGACGACTGT GCTCGGTGCC GGCCCTGCGT TTCTCGGCGT GATCGAAGGA GTGGCCGAAT CGACCGCGGC GCTGCTGAAG CTCGTCTCCG GCATCGTGTC CGACCGGACC AGAAGCCGCA AGGGGCTGGT TCTGGGGGGG TACGCCCTGT CGAGCCTGGC ACGTCCCCTG GTGGCTGCGG CAACGGGCCC GGTCGCGGTA CTGGCCATCC GCTTCGCCGA CCGGGTGGGG AAGGGGGTGC GGACCTCCCC CCGGGATGCT CTCATCGCCG ACTCTTCCGA TCCCTCGGTC CGGGGGAAGG CCTATGGCTT TCACCGGGCC ATGGATCACG CCGGAGCCCT CGTGGGCCCC CTGCTCGCCA CCCTGCTCCT GGCCGGCGCC GCCCTGGACC TGCGGACCGT GTTCTGGCTC TCGGCCGTAC CAGGGCTTCT GGCCGTACTT CTCATCATTT TGCGGGTCCG CGACGTGGAG CGGAAGCGAA CCAGCGACGG AAGCGTTCTG GGGGCGATAC CCAGGGATGG GCTCCGCCGG TACCTGGCCG TCCTCGTCCT GTTCACGCTG GGCAATTCCT CCGACGCCTT CCTGCTGCTG CGGGCGAGCC AGCTCGGGGT TTCGCCGGCG CGCATCCCGC TGCTGTGGGC CTTTTTTCAC CTGGTGAAGA TGCTGGCGTC CACTCCCTTC GGCGCCCTGT CGGACCGGAT CGGCCGTCGG CGGGTCATCG TTGCCGGCTG GGCAGTCTAC GCCCTGTCGT ACCTGGGGTT TGCCGCTGCC GCATCCGAGC CGGCCTGCTG GCTGCTCTTC GCCGTCTACG GCACCTTCTA CGGGATGACC GAAGGGACCG AAAAGGCGTT CGTCGCCGAT CTCGTCCCCG CCGAGGCCCG GGGCGGCGCC TTTGGCTGGT ACCATTTCGC CGTGGGCGTC GGGGCGCTGC CGGCCAGCGT GCTCTTCGGG TTGATCTGGG AGAGGGCCGG GCAGGGAGCG GCATTTCTGT TCGGCGCGGC GCTGGCAGCC CTGGCGTCAA TCCTGCTGCT CGTCCTGGTG AGGGAGGACC CGCCGGAGGC GCAGAGCCCG CGGAGCTCCT GA
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Protein sequence | MFSGISGNVL ILGVVSFLTD VSSEMIYPLL PLFLTTVLGA GPAFLGVIEG VAESTAALLK LVSGIVSDRT RSRKGLVLGG YALSSLARPL VAAATGPVAV LAIRFADRVG KGVRTSPRDA LIADSSDPSV RGKAYGFHRA MDHAGALVGP LLATLLLAGA ALDLRTVFWL SAVPGLLAVL LIILRVRDVE RKRTSDGSVL GAIPRDGLRR YLAVLVLFTL GNSSDAFLLL RASQLGVSPA RIPLLWAFFH LVKMLASTPF GALSDRIGRR RVIVAGWAVY ALSYLGFAAA ASEPACWLLF AVYGTFYGMT EGTEKAFVAD LVPAEARGGA FGWYHFAVGV GALPASVLFG LIWERAGQGA AFLFGAALAA LASILLLVLV REDPPEAQSP RSS
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