Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2720 |
Symbol | hoxU |
ID | 2686042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2996972 |
End bp | 2997688 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637127411 |
Product | bidirectional hydrogenase complex protein HoxU |
Protein accession | NP_953765 |
Protein GI | 39997814 |
COG category | [C] Energy production and conversion |
COG ID | [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGTCA TTACTCTGAC CATCGACGAC GAACTGATCA GCGGTCGCGA GGGGGAAACC CTGCTCCAGG TGATCAAGGA ACACGGCATA TCGCTCCCCA CCCTCTGTCA CATGGAGGGG CTCTCCGAGC GGGGCGGCTG CCGGCTTTGC ATCGTGGAGG TGGCGGGCAG CCCCCGGCCC CTCCCCGCCT GCACCACTCC GGCGCGCGAG GGGATGGTGG TGCGGACCCG GAGCGAGCGG CTGGAGAACT ACCGGCGGAT GCTCGTGGAG CTCATGCTCG CCGAACGCAA CCACTACTGT GCCGTCTGCG TCTCCATCGG CCACTGTGAG TTGCAGCGGG TGGCCGCCGA AATGGGGGTC GACCATGTCC GCTACGAATA CCTTTCGCCC AAGCTGACCA TGGATCTCTC CCACGAACGC TTCGGCCTGG ACCATAACCG CTGCATTCTC TGCACCCGGT GCGTCCGGGT CTGCGACGAG ATCGAAGGGG TGCACACCTG GGACATCTCC GGGCGTGGAG TGAAAAGCCG AATTATCGCC GATCTGAATC GCTCCTGGCG GGAGAGTGGC ACCTGTACCA GCTGCGGCAA GTGCGTTCAG GTTTGCCCCA CCGGTGCCCT GTTCCTCAAG GGGGCGGTGG TCGGCGAGAT GGTCAAGGAC CCGACCATGC TCGCCCGGGT GCTGGAAGGG CGGGAGAAAA AGGAGTGGGA AGGATGA
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Protein sequence | MPVITLTIDD ELISGREGET LLQVIKEHGI SLPTLCHMEG LSERGGCRLC IVEVAGSPRP LPACTTPARE GMVVRTRSER LENYRRMLVE LMLAERNHYC AVCVSIGHCE LQRVAAEMGV DHVRYEYLSP KLTMDLSHER FGLDHNRCIL CTRCVRVCDE IEGVHTWDIS GRGVKSRIIA DLNRSWRESG TCTSCGKCVQ VCPTGALFLK GAVVGEMVKD PTMLARVLEG REKKEWEG
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