Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2636 |
Symbol | |
ID | 2686238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2905877 |
End bp | 2907730 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637127326 |
Product | alpha-amylase family protein |
Protein accession | NP_953681 |
Protein GI | 39997730 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCAC CGCAATCGAT CAGGGACCTG GATCTGGAAC GCCTCTGCAA TCGCACCTTT CACCCTTCCC CGTCAGCCTG GGAGGACGAG GTGCTCTACT TCCTGCTGCT CGACCGCTTT TCCGACGGCA ACGAGACGGG CTACCGGGAC AACCGGGGAC GGCGCACGAA CCGGGGCGCC ACCCCGCTGT ACCGCCCGGC CGATGCGGGC AACGCCATCG CCACCGAGCC CGAGGCAGCG GCCTGGCGCG AGGCCGGCAC CCGCTGGTGC GGCGGGAACC TGAAGGGCCT CATGGACAAG ATGGGGTATC TCCGGCGATT GGGGGTGACC GCGGTCTGGG TCAGCCCCCT GTTCAAGCAG TGCTCATTTG TCCCCACCTA CCACGGTTAC GGTATCCAGA ACTTCCTGGA CGTGGACCCC CACTTCGGCA CTCGCGACGA CCTGCGGGAA CTAGTCCGCG TGGCCCACGC CAACGGCATT TACGTCATCC TCGACATCAT TCTCAATCAT GCGGGGAACG TGTTCGCCTA CGACCGGGGA TACACCCCCT ACGACGGCGG CACCAGCTAC CCGGTGACGG GATTCCGCAC GGCCGACGGC ACTCCGTCGC TTCCCTTCGG CCCCGTCGGT TCACCGGCCC CCGCCGAAGC CTGGCCCGAC GGTGCGGTCT GGCCCCGGGA ACTGCAGGCG CCGGAGTGCT TCACGCGCAA AGGATACATC CGGGATTGGG ACCGTTATCA CGAATACCTG GATGGTGATT TCTTCGACCT GAAGGATATT CACCTGGGCG ACGGGGACGT GGATTCGTTC AGTCCGTCCC CGGCGCTCCT GGCACTTTGC GAGGTGTACA AGTACTGGAT CGCCTACGCC GACCTGGACG GCTACCGGAT AGACACCGTA AAGCATATGG GCCCCGGGGC CACCCGTTTT TTCGCCTCCA CCATCCACGA ATTCGCCCAG AGGATCGGCA AGGAGAATTT CTATCTCATC GGTGAGATCA CCGGCGGCCG GGTCAATGCC TTCGACACCC TGGAGACCAC CGGCCTCAAC GCCGCGCTGG GGGTGGACGA CATTCCGCTG CGCCTGGAAG ATCTGGTGAA GGGAAAGGCC AACCCGGCCG ACTACTTCGA TCTCTTCCGC AACTCCCTGC TGGTGCGCAA GGAGTCCCAC ATCTGGTTCC GCGACAAGGT GGTGACGGTT ATCGACGACC ACGACCAGGT CTGCCGCGGC GCCAAGAAAG AGCGGTTCTG CGCCGGCGAT CCCACGTGGC GCAAGCTGGT GCCAAACGCC CTGGCCCTCA ATGCCACCAC CCTCGGCATC CCCTGCATCT ACTACGGTAC CGAGCAGGCC TTTGACGGCG AAGGGGGGGA CGACCGCTAC CTGCGCGAAT GCATGTTCGG CGGCCCCTTC GGCGCCTTTC GCAGCCGCGG GGTCCACTTC TTCGACGAGG ATAATCCGGT CTACCGGGAG TGTGCCAAGG TCCTTGCCCT GCGCCGTGAC ATCATCGCCC TGCGCCGGGG GCGCCAGTAT CTGCGGGAGA TCTCCGGCGA TGGAGTGAAC TTCGGGCTTC CCTACGTCAT CGGTGGCGAG ATCCGCTCCG TGGTGGCCTG GTCGCGGATC TTCGACACCG AAGAGATAGT TCTCGCCATC AACACCGACC CTGACCATCC GCGCACCGCA CTGGTGCTCG TGGACGGCTC CCTTCACCGG CCGGGGGACG TTTTCTTCTG CCGCTACTCG ACGGACCCGG GTCAGGTCCG TCGAAGGGTG AGGGTGCGGG ATGCCGGTCC CGCCATTCGG GCCGTAGAGC TTACGGTGCC GGCGGCCGGC TTCGTACTGT TCCAGAAGCG ATAA
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Protein sequence | MTAPQSIRDL DLERLCNRTF HPSPSAWEDE VLYFLLLDRF SDGNETGYRD NRGRRTNRGA TPLYRPADAG NAIATEPEAA AWREAGTRWC GGNLKGLMDK MGYLRRLGVT AVWVSPLFKQ CSFVPTYHGY GIQNFLDVDP HFGTRDDLRE LVRVAHANGI YVILDIILNH AGNVFAYDRG YTPYDGGTSY PVTGFRTADG TPSLPFGPVG SPAPAEAWPD GAVWPRELQA PECFTRKGYI RDWDRYHEYL DGDFFDLKDI HLGDGDVDSF SPSPALLALC EVYKYWIAYA DLDGYRIDTV KHMGPGATRF FASTIHEFAQ RIGKENFYLI GEITGGRVNA FDTLETTGLN AALGVDDIPL RLEDLVKGKA NPADYFDLFR NSLLVRKESH IWFRDKVVTV IDDHDQVCRG AKKERFCAGD PTWRKLVPNA LALNATTLGI PCIYYGTEQA FDGEGGDDRY LRECMFGGPF GAFRSRGVHF FDEDNPVYRE CAKVLALRRD IIALRRGRQY LREISGDGVN FGLPYVIGGE IRSVVAWSRI FDTEEIVLAI NTDPDHPRTA LVLVDGSLHR PGDVFFCRYS TDPGQVRRRV RVRDAGPAIR AVELTVPAAG FVLFQKR
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